RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ZBTB11O95625 1053 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PEBP1P30086 187 aaKnown RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ETV5P41161 510 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 MLLT3P42568 568 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 RAB15P59190 212 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 VSNL1P62760 191 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 FOXM1Q08050 763 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ZKSCAN8Q15776 578 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 TMEM164Q5U3C3 297 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 FBXO38Q6PIJ6 1188 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 CYHR1Q6ZMK1 362 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 TRIM73Q86UV7 250 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 KMT5CQ86Y97 462 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 LMNTD1Q8N9Z9 388 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 MCOLN3Q8TDD5 553 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 DENND1AQ8TEH3 1009 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC22A18Q96BI1 424 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PPM1MQ96MI6 270 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PKP4Q99569 1192 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 C1GALT1Q9NS00 363 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 OCIAD1Q9NX40 245 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC39A1Q9NY26 324 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 A0A0J9YY10 115 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 B4E171 279 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC16A5O15375 505 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC16A8O95907 504 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ENO2P09104 434 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 HIST1H2AGP0C0S8 130 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 FGF3P11487 239 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 NELFEP18615 380 aaKnown RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 HIST1H2ADP20671 130 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 TSPAN7P41732 249 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 MSH2P43246 934 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SERPINB8P50452 374 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PNLIPRP1P54315 467 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 HSD11B2P80365 405 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC5A12Q1EHB4 618 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 TBC1D25Q3MII6 688 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 MROH9Q5TGP6 573 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 CYB5D1Q6P9G0 228 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 IGF2-ASQ6U949 168 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 TMEM207Q6UWW9 146 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 FRA10AC1Q70Z53 315 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 CMC1Q7Z7K0 106 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 UBLCP1Q8WVY7 318 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC44A1Q8WWI5 657 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 KLHL6Q8WZ60 621 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC41A2Q96JW4 573 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 HIST1H2AHQ96KK5 128 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ZNF578Q96N58 590 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC46A1Q96NT5 459 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 OR2A14Q96R47 310 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 HIST1H2AJQ99878 128 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 H2AFJQ9BTM1 129 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SLC12A9Q9BXP2 914 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 TRIM54Q9BYV2 358 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PITPNM3Q9BZ71 974 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PARVBQ9HBI1 364 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 ASCL3Q9NQ33 180 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 SIDT1Q9NXL6 827 aaKnown RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-204ENST00000370496 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 FRYQ5TBA9 3013 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 SLC9B1P1A6NJY1 282 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 PRAMEF10O60809 474 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 SNRNP200O75643 2136 aaKnown RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 EBLN1P0CF75 366 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 CCDC166P0CW27 439 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 ERGP11308 486 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 PVRP15151 417 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 ST6GAL1P15907 406 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 CRABP2P29373 138 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 OAS2P29728 719 aaKnown RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 RPA3P35244 121 aaPredicted RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 HSD17B2P37059 387 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 SERPINB9P50453 376 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 SH3BP2P78314 561 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 TUBB3Q13509 450 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 KCNAB1Q14722 419 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 ARHGAP19Q14CB8 494 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 CYP2A13Q16696 494 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 PHKG1Q16816 387 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 ERCC6LQ2NKX8 1250 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 TAF1BQ53T94 588 aaPredicted RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 TMTC4Q5T4D3 741 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 TBC1D1Q86TI0 1168 aaPredicted RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 RASGRP3Q8IV61 690 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 BMPERQ8N8U9 685 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 C19orf47Q8N9M1 422 aaKnown RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 HMGCLL1Q8TB92 370 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 SMPDL3AQ92484 453 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 USP7Q93009 1102 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 PDLIM5Q96HC4 596 aaKnown RBP14.33□□□□□ -0.12
COL9A1-204ENST00000370496 OR6C1Q96RD1 312 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 TXLNGYQ9BZA5 131 aa14.33□□□□□ -0.12
COL9A1-204ENST00000370496 DERL2Q9GZP9 239 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms