RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 TRAM1L1Q8N609 369 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 HM13Q8TCT9 377 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 NECTIN4Q96NY8 510 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 FAM83CQ9BQN1 747 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 TRIM8Q9BZR9 551 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 LINC00597Q9H2U6 94 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 RPF2Q9H7B2 306 aaKnown RBP12.84□□□□□ -0.35
ECM1-202ENST00000369047 VCX3AQ9NNX9 186 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 PCDHGB4Q9UN71 923 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 PCDHGB5Q9Y5G0 923 aa12.84□□□□□ -0.35
ECM1-202ENST00000369047 ENO4A6NNW6 628 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 UGDHO60701 494 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ERN1O75460 977 aaKnown RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 PAPLNO95428 1278 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 PGRP06401 933 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ANXA6P08133 673 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 EPORP19235 508 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 MAPK9P45984 424 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 HNRNPFP52597 415 aaKnown RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 CLDN8P56748 225 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 OR4D2P58180 307 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 TUBA4AP68366 448 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 HMGCS1Q01581 520 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ROR2Q01974 943 aaKnown RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 PLOD1Q02809 727 aaPredicted RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 SMAD4Q13485 552 aaKnown RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 PTGR1Q14914 329 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 LEXMQ3ZCV2 418 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 FAM98BQ52LJ0 330 aaKnown RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 BORAQ6PGQ7 559 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 RFLNAQ6ZTI6 216 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 RIMKLAQ8IXN7 391 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 RAVER1Q8IY67 606 aaKnown RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 KIAA1958Q8N8K9 716 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 DDHD1Q8NEL9 900 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 TSPAN14Q8NG11 270 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 BPIFB1Q8TDL5 484 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 FRS2Q8WU20 508 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 SKA2Q8WVK7 121 aaPredicted RBP12.83□□□□□ -0.36
ECM1-202ENST00000369047 SELENOMQ8WWX9 145 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 CMTM7Q96FZ5 175 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ZNF583Q96ND8 569 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 UGT2B28Q9BY64 529 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ELOVL6Q9H5J4 265 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 DNAJC11Q9NVH1 559 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ZNHIT2Q9UHR6 403 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ZNF639Q9UID6 485 aa12.83□□□□□ -0.36
ECM1-202ENST00000369047 ARHGAP10A1A4S6 786 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 UPK3BL1B0FP48 263 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 UPK3BL2E5RIL1 263 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 H3BNH8 94 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ACOX3O15254 700 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 LINC01565O15544 149 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 SLCO2B1O94956 709 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 PDYNP01213 254 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ASLP04424 464 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 SRPRAP08240 638 aaKnown RBP12.82□□□□□ -0.36
ECM1-202ENST00000369047 RAP2AP10114 183 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 BCKDHAP12694 445 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 MYF6P23409 242 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 RPS14P62263 151 aaKnown RBP12.82□□□□□ -0.36
ECM1-202ENST00000369047 MERTKQ12866 999 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 CPSF6Q16630 551 aaKnown RBP eCLIP12.82□□□□□ -0.36
ECM1-202ENST00000369047 SGO1Q5FBB7 561 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 LDLRAP1Q5SW96 308 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 MBOAT1Q6ZNC8 495 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 RALGPS2Q86X27 583 aaPredicted RBP12.82□□□□□ -0.36
ECM1-202ENST00000369047 RASGRP3Q8IV61 690 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 VN1R2Q8NFZ6 395 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 RMND5BQ96G75 393 aaPredicted RBP12.82□□□□□ -0.36
ECM1-202ENST00000369047 MRGPRX3Q96LB0 322 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 VPS35Q96QK1 796 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 CHID1Q9BWS9 393 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 RMND5AQ9H871 391 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 CLK4Q9HAZ1 481 aaKnown RBP12.82□□□□□ -0.36
ECM1-202ENST00000369047 OLAHQ9NV23 265 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 FBXO10Q9UK96 956 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 OAZ3Q9UMX2 235 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 PRRC2BQ5JSZ5 2229 aaKnown RBP12.82□□□□□ -0.36
ECM1-202ENST00000369047 MYOFQ9NZM1 2061 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 FAM149AA5PLN7 773 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ZNF197O14709 1029 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 TPST1O60507 370 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 LEFTY1O75610 366 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 SCELO95171 688 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 TIMP2P16035 220 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 CYP4F3Q08477 520 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 SLC5A9Q2M3M2 681 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 PTCHD3Q3KNS1 767 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 SLC36A3Q495N2 470 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 RUNDC3AQ59EK9 446 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ZNF805Q5CZA5 627 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ATAT1Q5SQI0 421 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 LIPJQ5W064 366 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 ATG9BQ674R7 924 aa12.82□□□□□ -0.36
ECM1-202ENST00000369047 MSANTD1Q6ZTZ1 278 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms