RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LRRC56Q8IYG6 542 aaPredicted RBP23.19■■□□□ 1.3
SNX3-203ENST00000368979 PPFIBP2Q8ND30 876 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 ACTRT2Q8TDY3 377 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 WASH6PQ9NQA3 447 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 PRDM8Q9NQV8 689 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 A0A1W2PR77 199 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 PDZK1P1A8MUH7 402 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 PIP5K1BO14986 540 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 KIAA0754O94854 1291 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 TNFP01375 233 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 AK4P27144 223 aaPredicted RBP23.18■■□□□ 1.3
SNX3-203ENST00000368979 ARL1P40616 181 aaPredicted RBP23.18■■□□□ 1.3
SNX3-203ENST00000368979 SPRED3Q2MJR0 410 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 ABRAXAS1Q6UWZ7 409 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 MFSD2AQ8NA29 543 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 CCL4L1Q8NHW4 92 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 HSPA12BQ96MM6 686 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 MENTQ9BUN1 341 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 TBC1D29Q9UFV1 150 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 PCOLCE2Q9UKZ9 415 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 MEI4A8MW99 385 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 E7ENX8 843 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 E9PBE3 544 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 DCXO43602 365 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 KLHL41O60662 606 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 CHEK2O96017 543 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 WNT1P04628 370 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 TDGF1P13385 188 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 HGFP14210 728 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 PNLIPRP1P54315 467 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 HNRNPH2P55795 449 aaKnown RBP23.18■■□□□ 1.3
SNX3-203ENST00000368979 TBPL1P62380 186 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 TAP2Q03519 686 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 GGTA1PQ4G0N0 100 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 LACTB2Q53H82 288 aaPredicted RBP23.18■■□□□ 1.3
SNX3-203ENST00000368979 DCP2Q8IU60 420 aaKnown RBP23.18■■□□□ 1.3
SNX3-203ENST00000368979 SYTL1Q8IYJ3 562 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 RGL4Q8IZJ4 473 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 CEP70Q8NHQ1 597 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 METTL6Q8TCB7 284 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 MED8Q96G25 268 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 C3orf30Q96M34 536 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 OR4K3Q96R72 315 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 SGPP1Q9BX95 441 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 SAR1AQ9NR31 198 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 SPATA7Q9P0W8 599 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 BTRCQ9Y297 605 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 TDRKHQ9Y2W6 561 aaKnown RBP23.18■■□□□ 1.3
SNX3-203ENST00000368979 PTGDR2Q9Y5Y4 395 aa23.18■■□□□ 1.3
SNX3-203ENST00000368979 CLDN9O95484 217 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 CD38P28907 300 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 ACTR1BP42025 376 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 ACTR1AP61163 376 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 RACK1P63244 317 aaKnown RBP23.17■■□□□ 1.3
SNX3-203ENST00000368979 BNIP1Q12981 228 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 ARHGAP19Q14CB8 494 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 RPE65Q16518 533 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 TCHHL1Q5QJ38 904 aaPredicted RBP23.17■■□□□ 1.3
SNX3-203ENST00000368979 CAPN13Q6MZZ7 669 aaPredicted RBP23.17■■□□□ 1.3
SNX3-203ENST00000368979 TSSK4Q6SA08 328 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 IQCHQ86VS3 1027 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 NRROSQ86YC3 692 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 FERD3LQ96RJ6 166 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 IMP3Q9NV31 184 aaKnown RBP23.17■■□□□ 1.3
SNX3-203ENST00000368979 SCHIP1Q9P0W5 487 aaPredicted RBP23.17■■□□□ 1.3
SNX3-203ENST00000368979 KLF15Q9UIH9 416 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 PLAGL1Q9UM63 463 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 RNF11Q9Y3C5 154 aa23.17■■□□□ 1.3
SNX3-203ENST00000368979 MAP3K13O43283 966 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 PRAMEF4O60810 478 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 MAOBP27338 520 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 PCDH1Q08174 1060 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 PRKG2Q13237 762 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 FASTKQ14296 549 aaKnown RBP23.16■■□□□ 1.3
SNX3-203ENST00000368979 XKR7Q5GH72 579 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 PRAMEF9Q5VWM5 478 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 RNF165Q6ZSG1 346 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 LARP4Q71RC2 724 aaKnown RBP eCLIP23.16■■□□□ 1.37e-6■□□□□ 9
SNX3-203ENST00000368979 PARGQ86W56 976 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 DDIASQ8IXT1 998 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 L3MBTL4Q8NA19 623 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 C1orf216Q8TAB5 229 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 GPBAR1Q8TDU6 330 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 IL17FQ96PD4 163 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 CCDC106Q9BWC9 280 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 SLC29A3Q9BZD2 475 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 DUSP15Q9H1R2 295 aaPredicted RBP23.16■■□□□ 1.3
SNX3-203ENST00000368979 MVB12BQ9H7P6 319 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 ACTR8Q9H981 624 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 GPRC5BQ9NZH0 403 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 TRIM33Q9UPN9 1127 aa23.16■■□□□ 1.3
SNX3-203ENST00000368979 KCNE1BA0A087WTH5 132 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 A6NCN8 305 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 OR52A4PA6NMU1 304 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 EML2O95834 649 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 MTHFD1P11586 935 aaKnown RBP23.15■■□□□ 1.3
SNX3-203ENST00000368979 HMOX2P30519 316 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 HSD17B2P37059 387 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 HALP42357 657 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 HTR6P50406 440 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms