RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ASZ1Q8WWH4 475 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 ATG4AQ8WYN0 398 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 PEX13Q92968 403 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 ZNF778Q96MU6 729 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 NDC1Q9BTX1 674 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 FRMD8P1Q9BZ68 369 aaPredicted RBP15.41■□□□□ 0.06
CKS1B-202ENST00000368436 SLC29A3Q9BZD2 475 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 RBSNQ9H1K0 784 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 ZNF552Q9H707 407 aaPredicted RBP15.41■□□□□ 0.06
CKS1B-202ENST00000368436 CASS4Q9NQ75 786 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 SLC22A11Q9NSA0 550 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 RNF224P0DH78 156 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 MAGP20916 626 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 CD9P21926 228 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 CSE1LP55060 971 aaKnown RBP15.4■□□□□ 0.06
CKS1B-202ENST00000368436 HSPA14Q0VDF9 509 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 MRPL49Q13405 166 aaKnown RBP15.4■□□□□ 0.06
CKS1B-202ENST00000368436 EIF2S3LQ2VIR3 472 aaKnown RBP15.4■□□□□ 0.06
CKS1B-202ENST00000368436 UNC5DQ6UXZ4 953 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 PPP1R21Q6ZMI0 780 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 TMEM151BQ8IW70 566 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 CLEC1AQ8NC01 280 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 OR6P1Q8NGX9 317 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 LKAAEAR1Q8TD35 194 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 NACC2Q96BF6 587 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 SNRNP40Q96DI7 357 aaKnown RBP15.4■□□□□ 0.06
CKS1B-202ENST00000368436 C19orf60Q96EN9 201 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 TSSK1BQ9BXA7 367 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 ENAMQ9NRM1 1142 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 B3GNT3Q9Y2A9 372 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 KLHL20Q9Y2M5 609 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 CAPN6Q9Y6Q1 641 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 HIVEP3Q5T1R4 2406 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 DOCK10Q96BY6 2186 aa15.4■□□□□ 0.06
CKS1B-202ENST00000368436 KRT86O43790 486 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 IPO13O94829 963 aaKnown RBP15.39■□□□□ 0.05
CKS1B-202ENST00000368436 SLCO2B1O94956 709 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 RPN2P04844 631 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 ALPPP05187 535 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 ITGAXP20702 1163 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 AOAHP28039 575 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 PPARGP37231 505 aaPredicted RBP15.39■□□□□ 0.05
CKS1B-202ENST00000368436 ARSFP54793 590 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 FOXL2P58012 376 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 SLC9A5Q14940 896 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 FASTKD1Q53R41 847 aaKnown RBP15.39■□□□□ 0.05
CKS1B-202ENST00000368436 CRB2Q5IJ48 1285 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 HIST2H2BCQ6DN03 193 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 MCATQ8IVS2 390 aaKnown RBP15.39■□□□□ 0.05
CKS1B-202ENST00000368436 DCUN1D3Q8IWE4 304 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 IQCKQ8N0W5 287 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 OR2L8Q8NGY9 312 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 DENND1AQ8TEH3 1009 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 DLG3Q92796 817 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 FKBP10Q96AY3 582 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 SLC22A18Q96BI1 424 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 ATP13A2Q9NQ11 1180 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 TCAF1Q9Y4C2 921 aa15.39■□□□□ 0.05
CKS1B-202ENST00000368436 PRRC2CQ9Y520 2896 aaKnown RBP15.38■□□□□ 0.05
CKS1B-202ENST00000368436 IQCF5A8MTL0 148 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 E7EVH7 732 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 AGPSO00116 658 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 PRICKLE3O43900 615 aaPredicted RBP15.38■□□□□ 0.05
CKS1B-202ENST00000368436 CBX6O95503 412 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 DDAH2O95865 285 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 S1PR4O95977 384 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 ALBP02768 609 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 APOA4P06727 396 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 ALAS2P22557 587 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 PRAMEP78395 509 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 FCRL6Q6DN72 434 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 OVCH1Q7RTY7 1134 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 PRUNE1Q86TP1 453 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 SLC13A5Q86YT5 568 aaPredicted RBP15.38■□□□□ 0.05
CKS1B-202ENST00000368436 RNF10Q8N5U6 811 aaKnown RBP15.38■□□□□ 0.05
CKS1B-202ENST00000368436 LMNTD1Q8N9Z9 388 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 IL17FQ96PD4 163 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 RAB6BQ9NRW1 208 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 ASF1BQ9NVP2 202 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 MAP10Q9P2G4 905 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 ZNF148Q9UQR1 794 aa15.38■□□□□ 0.05
CKS1B-202ENST00000368436 A0A1B0GX78 115 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 WIPF3A6NGB9 483 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 MASP2O00187 686 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 PRMT5O14744 637 aaPredicted RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 RASGRF2O14827 1237 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 IFNB1P01574 187 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 ETS1P14921 441 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 MMP11P24347 488 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 AIMP2Q13155 320 aaKnown RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 CYP2A13Q16696 494 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 ZC3H12BQ5HYM0 836 aaKnown RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 AARS2Q5JTZ9 985 aaKnown RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 YOD1Q5VVQ6 348 aaPredicted RBP15.37■□□□□ 0.05
CKS1B-202ENST00000368436 FIGLAQ6QHK4 219 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 Q6ZS92 163 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 TTLL10Q6ZVT0 673 aa15.37■□□□□ 0.05
CKS1B-202ENST00000368436 LDB1Q86U70 411 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms