RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 N4BP2L2Q92802 583 aaPredicted RBP23.09■■□□□ 1.29
PFDN2-201ENST00000368010 CFAP36Q96G28 342 aa23.09■■□□□ 1.29
PFDN2-201ENST00000368010 CHRNA10Q9GZZ6 450 aa23.09■■□□□ 1.29
PFDN2-201ENST00000368010 SERTAD3Q9UJW9 196 aa23.09■■□□□ 1.29
PFDN2-201ENST00000368010 MED16Q9Y2X0 877 aa23.09■■□□□ 1.29
PFDN2-201ENST00000368010 SNX24Q9Y343 169 aa23.09■■□□□ 1.29
PFDN2-201ENST00000368010 PCDHB3Q9Y5E6 796 aa23.09■■□□□ 1.29
PFDN2-201ENST00000368010 FAM187AA6NFU0 413 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 CYP2A7P20853 494 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 MC1RQ01726 317 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 CCSMST1Q4G0I0 132 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 MAATS1Q7Z4T9 603 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 GIMAP7Q8NHV1 300 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 SLC30A3Q99726 388 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 AARSD1Q9BTE6 412 aaKnown RBP23.08■■□□□ 1.29
PFDN2-201ENST00000368010 FAM60AQ9NP50 221 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 PPANQ9NQ55 473 aaKnown RBP23.08■■□□□ 1.29
PFDN2-201ENST00000368010 SPATA7Q9P0W8 599 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 KCND3Q9UK17 655 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 TEX264Q9Y6I9 313 aa23.08■■□□□ 1.29
PFDN2-201ENST00000368010 VPS26AO75436 327 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 RPL21P46778 160 aaKnown RBP23.07■■□□□ 1.28
PFDN2-201ENST00000368010 ITGA1P56199 1179 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 MRPS25P82663 173 aaKnown RBP23.07■■□□□ 1.28
PFDN2-201ENST00000368010 C2orf54Q08AI8 447 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 ZIC1Q15915 447 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 KIAA0408Q6ZU52 694 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 NEK10Q6ZWH5 1172 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 CNTN4Q8IWV2 1026 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 LMNTD1Q8N9Z9 388 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 CT55Q8WUE5 264 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 INPP5DQ92835 1189 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 EXTL1Q92935 676 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 GPR21Q99679 349 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 ARHGAP9Q9BRR9 750 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 FAM114A2Q9NRY5 505 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.07■■□□□ 1.28
PFDN2-201ENST00000368010 DHRS7Q9Y394 339 aa23.07■■□□□ 1.28
PFDN2-201ENST00000368010 MGAQ8IWI9 3026 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 C21orf140B9A014 251 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 E7EQ34 232 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 TERTO14746 1132 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 TP73O15350 636 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 NKX2-8O15522 239 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 PSIP1O75475 530 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 CATP04040 527 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 ENO3P13929 434 aaPredicted RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 TCN2P20062 427 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 MAGP20916 626 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 F8A1P23610 371 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 CARSP49589 748 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 DNASE1L3Q13609 305 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 CUL1Q13616 776 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 SF1Q15637 639 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 PRAMEF17Q5VTA0 474 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 FAM20CQ8IXL6 584 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 GPR135Q8IZ08 494 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 HMGCLL1Q8TB92 370 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 CLIP3Q96DZ5 547 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 LRFN5Q96NI6 719 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 CATSPER2Q96P56 530 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 WDR83Q9BRX9 315 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 ERP44Q9BS26 406 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 SLC7A5P2Q9GIP4 190 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 ACTR5Q9H9F9 607 aaPredicted RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 PLAC1Q9HBJ0 212 aa23.06■■□□□ 1.28
PFDN2-201ENST00000368010 INTS7Q9NVH2 962 aaKnown RBP23.06■■□□□ 1.28
PFDN2-201ENST00000368010 KRT87PA6NCN2 255 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 ARHGEF33A8MVX0 844 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 KATNA1O75449 491 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 FKBP9O95302 570 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 KLK3P07288 261 aaPredicted RBP23.05■■□□□ 1.28
PFDN2-201ENST00000368010 PRKAR1AP10644 381 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 OAS2P29728 719 aaKnown RBP23.05■■□□□ 1.28
PFDN2-201ENST00000368010 CDC20Q12834 499 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 PDIA2Q13087 525 aaKnown RBP23.05■■□□□ 1.28
PFDN2-201ENST00000368010 CALCOCO2Q13137 446 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 GPS2Q13227 327 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 TBR1Q16650 682 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 DEFB110Q30KQ9 67 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.05■■□□□ 1.28
PFDN2-201ENST00000368010 STEAP4Q687X5 459 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 UGT3A1Q6NUS8 523 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 OR9A1PQ8NGU1 263 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 CD200R1Q8TD46 325 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 DENND1AQ8TEH3 1009 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 MR1Q95460 341 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 NDNQ99608 321 aa23.05■■□□□ 1.28
PFDN2-201ENST00000368010 TRMT6Q9UJA5 497 aaKnown RBP23.05■■□□□ 1.28
PFDN2-201ENST00000368010 MRPS18BQ9Y676 258 aaKnown RBP23.05■■□□□ 1.28
PFDN2-201ENST00000368010 LOC400499M0QZD8 3231 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 RAD51CO43502 376 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 OR2B3O76000 313 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 MPC1LP0DKB6 136 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 CBSLP0DN79 551 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 CBSP35520 551 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 GABRA4P48169 554 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 LY6DQ14210 128 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 LINC00303Q3SY05 128 aa23.04■■□□□ 1.28
PFDN2-201ENST00000368010 CRTC2Q53ET0 693 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms