RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 LIN54Q6MZP7 749 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 CXCL17Q6UXB2 119 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ZZZ3Q8IYH5 903 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 CMTR2Q8IYT2 770 aaKnown RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 BOLLQ8N9W6 283 aaKnown RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 FAM83FQ8NEG4 500 aaPredicted RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 SPATA13Q96N96 652 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 AGAP2Q99490 1192 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 SSX3Q99909 188 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 DNAJB9Q9UBS3 223 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ADAM28Q9UKQ2 775 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 RAB23Q9ULC3 237 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 TLL2Q9Y6L7 1015 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 CITO14578 2027 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 C17orf102A2RUQ5 167 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 POM121CA8CG34 1229 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 FGF3P11487 239 aaPredicted RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 ZNF3P17036 446 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ARNTP27540 789 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 HNF1BP35680 557 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 THPOP40225 353 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 TPMTP51580 245 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 GPAT3Q53EU6 434 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 PAMR1Q6UXH9 720 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 RPS27LQ71UM5 84 aaKnown RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 TMEM132CQ8N3T6 1108 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ATAD1Q8NBU5 361 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 OR6Q1Q8NGQ2 317 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ANKRD49Q8WVL7 239 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ERVK-6Q9BXR3 956 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 RBCK1Q9BYM8 510 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ACTR10Q9NZ32 417 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 MAU2Q9Y6X3 613 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 COL2A1P02458 1487 aaPredicted RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 SMIM28A0A1B0GU29 152 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 IQCMA0A1B0GVH7 501 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 TOR1AO14656 332 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 PSMD3O43242 534 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 TCF3P15923 654 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 DDX6P26196 483 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRKN-206ENST00000366898 DCKP27707 260 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ACADLP28330 430 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 MAP2K3P46734 347 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 PPP3CCP48454 512 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ZNF132P52740 706 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 CAPZA1P52907 286 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 CEBPGP53567 150 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 TCEAL1Q15170 157 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 TEAD4Q15561 434 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 ANKRD53Q8N9V6 530 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 COQ10AQ96MF6 247 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 GIMAP2Q9UG22 337 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 EIF2B4Q9UI10 523 aaKnown RBP11.49□□□□□ -0.57
PRKN-206ENST00000366898 HCN2Q9UL51 889 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 AP3M1Q9Y2T2 418 aa11.49□□□□□ -0.57
PRKN-206ENST00000366898 SLC15A5A6NIM6 579 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 CCNDBP1O95273 360 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 AGXTP21549 392 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 GSTM2P28161 218 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 LCN1P31025 176 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 C9orf57Q5W0N0 161 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 ELP2Q6IA86 826 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 MRNIPQ6NTE8 343 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 CDC73Q6P1J9 531 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 CORO6Q6QEF8 472 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 ROPN1LQ96C74 230 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 HOXD1Q9GZZ0 328 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 TBC1D17Q9HA65 648 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 NECTIN3Q9NQS3 549 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 RPH3AQ9Y2J0 694 aaPredicted RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 STX11O75558 287 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 LCKP06239 509 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 LEPRP48357 1165 aaKnown RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 SCNN1GP51170 649 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 DEFA6Q01524 100 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 PKN3Q6P5Z2 889 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 USP30Q70CQ3 517 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 BTLAQ7Z6A9 289 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 FAM217AQ8IXS0 508 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 SAMD14Q8IZD0 417 aaPredicted RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 ARFGAP1Q8N6T3 406 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 OR5J2Q8NH18 312 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 LRRC58Q96CX6 371 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 TXNDC15Q96J42 360 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 CSPG4P5Q96PW8 444 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 ASPNQ9BXN1 380 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 GBA2Q9HCG7 927 aaPredicted RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 CCM2LQ9NUG4 571 aaPredicted RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 ZNF490Q9ULM2 529 aaPredicted RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 ADAMTS5Q9UNA0 930 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 ELOVL7A1L3X0 281 aa11.48□□□□□ -0.57
PRKN-206ENST00000366898 KPNA3O00505 521 aaPredicted RBP11.48□□□□□ -0.57
PRKN-206ENST00000366898 MFSD11O43934 449 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms