RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.79□□□□□ -0.523e-18■■■■■ 55.1
CDC42BPA-203ENST00000366766 SATL1Q86VE3 508 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 OAZ3Q9UMX2 235 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 MRPS7Q9Y2R9 242 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 TOGARAM1Q9Y4F4 1720 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 F2P00734 622 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 EBLN1P0CF75 366 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SIRPB2Q5JXA9 342 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 MGME1Q9BQP7 344 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 COMMD4Q9H0A8 199 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TMEM88BA6NKF7 163 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TRIM3O75382 744 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 VIPP01282 170 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 FPR1P21462 350 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 AJAP1Q9UKB5 411 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF536O15090 1300 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 MTRF1O75570 445 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 GADD45GO95257 159 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 CDH12P55289 794 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 DMPKQ09013 629 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC9B1Q4ZJI4 515 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TIGD5Q53EQ6 642 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 RTP4Q96DX8 246 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 LRIG1Q96JA1 1093 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 PCDHGB6Q9Y5F9 930 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 AP1M2Q9Y6Q5 423 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 CREB1P16220 341 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 E2F2Q14209 437 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 GALNT5Q7Z7M9 940 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC35G5Q96KT7 338 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 DUS2Q9NX74 493 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 B3GALT2O43825 422 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TACSTD2P09758 323 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF3P17036 446 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 UGT1A3P35503 534 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SIM2Q14190 667 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 DUOXA1Q1HG43 343 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 RFWD3Q6PCD5 774 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 COPS7AQ9UBW8 275 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 MIA3Q5JRA6 1907 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 A0A0X1KG70 313 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF630Q2M218 657 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 MSANTD1Q6ZTZ1 278 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SIDT2Q8NBJ9 832 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR10H5Q8NGA6 315 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF570Q96NI8 536 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SUV39H2Q9H5I1 410 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 PHIPQ8WWQ0 1821 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3DA0A087WVF3 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3IA0A087WXS9 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3EA0A087X179 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3KA0A087X1G2 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3FA6NER0 549 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3LB9A6J9 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 EI24O14681 340 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3HP0C7X1 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 AQP1P29972 269 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC9A5Q14940 896 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TIGD6Q17RP2 521 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3GQ6DHY5 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3CQ6IPX1 549 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 FBXL22Q6P050 247 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TBC1D3Q8IZP1 549 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR56A1Q8NGH5 318 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF563Q8TA94 476 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 LCN9Q8WX39 176 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 OTUB2Q96DC9 234 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 KCTD7Q96MP8 289 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 TEX46H3BTG2 121 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 FZD9O00144 591 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 IFNA6P05013 189 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 QSOX2Q6ZRP7 698 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 DPF3Q92784 378 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 FKBP10Q96AY3 582 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 PCDHGC4Q9Y5F7 938 aa11.78□□□□□ -0.52
CDC42BPA-203ENST00000366766 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 PCDH7O60245 1069 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 SUOXP51687 545 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 EIF5AP63241 154 aaKnown RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF527Q8NB42 609 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF641Q96N77 438 aaPredicted RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 FCRL4Q96PJ5 515 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 TRNAU1APQ9NX07 287 aaKnown RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 EVLQ9UI08 416 aaPredicted RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 NUMBP49757 651 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 KCNC4Q03721 635 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 GRB14Q14449 540 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF773Q6PK81 442 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 KIAA1324Q6UXG2 1013 aaKnown RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 DCAF4L2Q8NA75 395 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms