RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 OR6K2Q8NGY2 324 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 STAG3L4Q8TBR4 150 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 PROKR1Q8TCW9 393 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 ZBTB18Q99592 522 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 TRIM62Q9BVG3 475 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 ZMYM5Q9UJ78 669 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 SSX4O60224 188 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 GUCA1CO95843 209 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 SERPINF2P08697 491 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 STC1P52823 247 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 ERVK-8P63133 956 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 PLEKHG6Q3KR16 790 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 ATAD3CQ5T2N8 411 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 PAF1Q8N7H5 531 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 OR5K1Q8NHB7 308 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 SH3GL1Q99961 368 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 AARSD1Q9BTE6 412 aaKnown RBP19.21■□□□□ 0.67
TRIM58-201ENST00000366481 BEX2Q9BXY8 128 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 RPRD1BQ9NQG5 326 aaKnown RBP19.21■□□□□ 0.67
TRIM58-201ENST00000366481 EHD3Q9NZN3 535 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 SNX6Q9UNH7 406 aa19.21■□□□□ 0.67
TRIM58-201ENST00000366481 LOC285095A0A1B0GVY8 99 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 KRT87PA6NCN2 255 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 CXCR6O00574 342 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 DUSP11O75319 330 aaKnown RBP19.2■□□□□ 0.66
TRIM58-201ENST00000366481 MASP1P48740 699 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 FLT3LGP49771 235 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 HTR6P50406 440 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 CLLU1OSQ5K130 101 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 GLB1LQ6UWU2 654 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
TRIM58-201ENST00000366481 GDPD3Q7L5L3 318 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 GPR62Q9BZJ7 368 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 VAPAQ9P0L0 249 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 PRELID1Q9Y255 219 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 ZNF236Q9UL36 1845 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 ELOVL7A1L3X0 281 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 ZSCAN5BA6NJL1 495 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 CENPBD1B2RD01 187 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 SERPINA1P01009 418 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 CNPP09543 421 aaKnown RBP19.2■□□□□ 0.66
TRIM58-201ENST00000366481 SLC2A4P14672 509 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 MGAT3Q09327 533 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 SLC14A2Q15849 920 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 SOWAHCQ53LP3 525 aaPredicted RBP19.2■□□□□ 0.66
TRIM58-201ENST00000366481 NEK10Q6ZWH5 1172 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 PARP16Q8N5Y8 322 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 APOL4Q9BPW4 351 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 CHCHD6Q9BRQ6 235 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 PRRG3Q9BZD7 231 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 MMP27Q9H306 513 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 GKN1Q9NS71 199 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 ERVK13-1Q9NX77 482 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 OPTCQ9UBM4 332 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
TRIM58-201ENST00000366481 TLR5O60602 858 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 WISP3O95389 354 aaPredicted RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 RPL17P18621 184 aaKnown RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 SLC6A4P31645 630 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 ZNF544Q6NX49 715 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 PLSCR3Q9NRY6 295 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 SCML2Q9UQR0 700 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 PTTG1O95997 202 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 KRT6CP48668 564 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 KRR1Q13601 381 aaKnown RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 MAPKAPK3Q16644 382 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 AGAP6Q5VW22 663 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 FUBP1Q96AE4 644 aaKnown RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 YIPF6Q96EC8 236 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 AGAP4Q96P64 663 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 KCNS3Q9BQ31 491 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 ABCG8Q9H221 673 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 RNF167Q9H6Y7 350 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 ZFP14Q9HCL3 533 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 ACOT13Q9NPJ3 140 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 SMPD4Q9NXE4 827 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 TAS2R13Q9NYV9 303 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 ZFP37Q9Y6Q3 630 aaPredicted RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 LOC110117498-PIK3R3F6TDL0 507 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 NAT1P18440 290 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 SGSHP51688 502 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 ARMC4Q5T2S8 1044 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 DENND1CQ8IV53 801 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 CCDC117Q8IWD4 279 aaPredicted RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 BRSK1Q8TDC3 778 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 TSPEARQ8WU66 669 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 C1orf74Q96LT6 269 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 FAM193BQ96PV7 902 aaPredicted RBP19.19■□□□□ 0.66
TRIM58-201ENST00000366481 BBS2Q9BXC9 721 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 SLC52A3Q9NQ40 469 aa19.19■□□□□ 0.66
TRIM58-201ENST00000366481 FFAR3O14843 346 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 GPR42O15529 346 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 ZNF623O75123 536 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 MSH3P20585 1137 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 GADD45AP24522 165 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 HK3P52790 923 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.18■□□□□ 0.66
TRIM58-201ENST00000366481 GPRIN3Q6ZVF9 776 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 LACC1Q8IV20 430 aa19.18■□□□□ 0.66
TRIM58-201ENST00000366481 CLHC1Q8NHS4 586 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms