RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SIKE1Q9BRV8 207 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 CLPBQ9H078 707 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 TFB2MQ9H5Q4 396 aaKnown RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 SMOXQ9NWM0 555 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 ZDHHC3Q9NYG2 299 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 CPSF2Q9P2I0 782 aaKnown RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 PISDQ9UG56 409 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 DHRS7Q9Y394 339 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 USH1CQ9Y6N9 552 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 TNRC6AQ8NDV7 1962 aaKnown RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 IGLV3-16A0A075B6K0 115 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 PRAMEF33A0A0G2JMD5 474 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 SPTY2D1-AS1A0A0U1RR47 76 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 CCT8L1PA6NM43 557 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 KPNA3O00505 521 aaPredicted RBP10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 DLX3O60479 287 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 PRAMEF10O60809 474 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 JMJD7P0C870 316 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 JUNDP17535 347 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 UGT1A6P19224 532 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 TFEBP19484 476 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 UGT1A1P22309 533 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 UGT1A4P22310 534 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 CA5AP35218 305 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 UGT1A3P35503 534 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 SERPINB5P36952 375 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 NSG1P42857 185 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 ELP6Q0PNE2 266 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 IFT88Q13099 833 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 EIF2B5Q13144 721 aaKnown RBP10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 TMEM259Q4ZIN3 620 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 PAQR3Q6TCH7 311 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 HSD11B1LQ7Z5J1 315 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 TECPR1Q7Z6L1 1165 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 ZFAND4Q86XD8 727 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 SLC22A9Q8IVM8 553 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 SLC35F3Q8IY50 421 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 SPATA6LQ8N4H0 392 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 TRAM1L1Q8N609 369 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 CD200R1Q8TD46 325 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 LMX1AQ8TE12 382 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 PPP4R1Q8TF05 950 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 KIAA1191Q96A73 305 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 RAB7BQ96AH8 199 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 PDLIM5Q96HC4 596 aaKnown RBP10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 GPR21Q99679 349 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 GATA5Q9BWX5 397 aaPredicted RBP10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 HDAC8Q9BY41 377 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 C20orf27Q9GZN8 174 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 DRC3Q9H069 523 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 FAM83DQ9H4H8 585 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 LATS2Q9NRM7 1088 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 KLHL42Q9P2K6 505 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 TRMT6Q9UJA5 497 aaKnown RBP10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 PCDHB11Q9Y5F2 797 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 OTOGQ6ZRI0 2925 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 CELSR1Q9NYQ6 3014 aa10.98□□□□□ -0.65
CSNK1E-202ENST00000366216 CSMD1Q96PZ7 3565 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 D6RAR5 112 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 E5RI56 91 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 AREL1O15033 823 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 GPR39O43194 453 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 ITM2AO43736 263 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 ZBTB14O43829 449 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 NPHS1O60500 1241 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 NIPSNAP2O75323 286 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 IPO13O94829 963 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 CHRM3P20309 590 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 CLCN7P51798 805 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 HK2P52789 917 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 TMEM52BQ4KMG9 183 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 ATP13A5Q4VNC0 1218 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 LRRC73Q5JTD7 316 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 HENMT1Q5T8I9 393 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 PTRHD1Q6GMV3 140 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 NAPRTQ6XQN6 538 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 LIPIQ6XZB0 460 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 RFLNAQ6ZTI6 216 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 ERN2Q76MJ5 926 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 TRPM8Q7Z2W7 1104 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 PIWIL4Q7Z3Z4 852 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 DTX1Q86Y01 620 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 WDR75Q8IWA0 830 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 RFWD2Q8NHY2 731 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 STAG3L4Q8TBR4 150 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 PIWIL2Q8TC59 973 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 CCT6BQ92526 530 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 INPP5DQ92835 1189 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 MIB2Q96AX9 1013 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 PTERQ96BW5 349 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 GFM1Q96RP9 751 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 SORT1Q99523 831 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 COPS8Q99627 209 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 ZSCAN5AQ9BUG6 496 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 SLC12A9Q9BXP2 914 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 KCNK13Q9HB14 408 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms