RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GALNT13Q8IUC8 556 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 OR10S1Q8NGN2 331 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 TAS1R2Q8TE23 839 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 UTP15Q8TED0 518 aaKnown RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 SECISBP2LQ93073 1101 aaKnown RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF830Q96NB3 372 aaPredicted RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 PCYT2Q99447 389 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 MTERF1Q99551 399 aaKnown RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC29A3Q9BZD2 475 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CRNKL1Q9BZJ0 848 aaKnown RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 UPF3AQ9H1J1 476 aaKnown RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 HAO2Q9NYQ3 351 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 C1RLQ9NZP8 487 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 THEGQ9P2T0 379 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 OSGIN1Q9UJX0 560 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 MYO6Q9UM54 1294 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 EXOC6BQ9Y2D4 811 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 NCOR1O75376 2440 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 ELP1O95163 1332 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 MYH13Q9UKX3 1938 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 IGKV6D-41A0A0C4DH26 115 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 CCER2I3L3R5 266 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 IPO8O15397 1037 aaKnown RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 NDUFS4O43181 175 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 KCNJ13O60928 360 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 DUSP11O75319 330 aaKnown RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GAGE7O76087 117 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 C22orf31O95567 290 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 CRYABP02511 175 aaKnown RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 ASGR1P07306 291 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 QDPRP09417 244 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GAGE12FP0CL80 117 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GAGE12GP0CL81 117 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GAGE12IP0CL82 117 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 SRCP12931 536 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 DNASE1P24855 282 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 PCYT1AP49585 367 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF81P51508 661 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 PGGT1BP53609 377 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 CSE1LP55060 971 aaKnown RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 CNTN2Q02246 1040 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 DSC1Q08554 894 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GAGE1Q13065 139 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GAGE4Q13068 117 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 TRAF3Q13114 568 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 OASLQ15646 514 aaKnown RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 XKR9Q5GH70 373 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZDHHC20Q5W0Z9 365 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF425Q6IV72 752 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 CTR9Q6PD62 1173 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 IL27RAQ6UWB1 636 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 RBPMS2Q6ZRY4 209 aaKnown RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 CCDC186Q7Z3E2 898 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 PM20D2Q8IYS1 436 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 PGBD5Q8N414 524 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 XXYLT1Q8NBI6 393 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 TSPAN14Q8NG11 270 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 OR5R1Q8NH85 324 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC44A1Q8WWI5 657 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 LINC00615Q96LM1 132 aaPredicted RBP5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 EDEM3Q9BZQ6 932 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 GPR88Q9GZN0 384 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 TRPV6Q9H1D0 765 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 ST6GALNAC4Q9H4F1 302 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 OPA3Q9H6K4 179 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 PCDH9Q9HC56 1237 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 OLAHQ9NV23 265 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 MRGBPQ9NV56 204 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 SELENONQ9NZV5 590 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 AK9Q5TCS8 1911 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 MAST2Q6P0Q8 1798 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZBED9Q6R2W3 1325 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 LTBP2Q14767 1821 aa5.44□□□□□ -1.54
RNU4-39P-201ENST00000362455 F5H6K3 240 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZBTB43O43298 467 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 SPRY1O43609 319 aaPredicted RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 TBCAO75347 108 aaKnown RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 RFPL2O75678 378 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 TRUB2O95900 331 aaKnown RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 NDUFB10O96000 172 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 CCDC175P0C221 793 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 KCNA5P22460 613 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 HOXA11P31270 313 aaPredicted RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 CCL23P55773 120 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 KLRC3Q07444 240 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 RALGDSQ12967 914 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 PPIGQ13427 754 aaKnown RBP eCLIP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 C6orf163Q5TEZ5 329 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 CST9LP1Q5W188 147 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 SNRNP48Q6IEG0 339 aaKnown RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 CXCL17Q6UXB2 119 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF534Q76KX8 674 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 ARMCX2Q7L311 632 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 GLCCI1Q86VQ1 547 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 IQCHQ86VS3 1027 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 GCSAMQ8N6F7 178 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 FAM133AQ8N9E0 248 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 WDR20Q8TBZ3 569 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 MAGEC3Q8TD91 643 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 FAM216AQ8WUB2 273 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms