RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 GRPEL2Q8TAA5 225 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 IMP4Q96G21 291 aaKnown RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 MED30Q96HR3 178 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 NUDT5Q9UKK9 219 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 PCDHB14Q9Y5E9 798 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 SNX10Q9Y5X0 201 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 PEX16Q9Y5Y5 336 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 PLXNA3P51805 1871 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 NYNRINQ9P2P1 1898 aaKnown RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 GOLGA8CPA6NN73 597 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 FADS2O95864 444 aaKnown RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 PPIGQ13427 754 aaKnown RBP eCLIP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 DGCR6Q14129 220 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 AFMIDQ63HM1 303 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 SYVN1Q86TM6 617 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 HS3ST5Q8IZT8 346 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 METTL4Q8N3J2 472 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 OR6F1Q8NGZ6 308 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 RHBDF1Q96CC6 855 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 TMEM169Q96HH4 297 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 SIGLEC11Q96RL6 698 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 CCDC32Q9BV29 185 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 VN1R3Q9BXE9 311 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 DCAF13Q9NV06 445 aaKnown RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 CRNNQ9UBG3 495 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 LCHNA4D1U4 455 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 PDZK1P1A8MUH7 402 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 LOC110117498-PIK3R3F6TDL0 507 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 CXCR6O00574 342 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 GLP2RO95838 553 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 TRAPPC2P0DI81 140 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 TRAPPC2BP0DI82 140 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ACRP10323 421 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ARPP19P56211 112 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 GNG2P59768 71 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 CDK10Q15131 360 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 BRMS1LQ5PSV4 323 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 MFSD4BQ5TF39 518 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 KIAA1841Q6NSI8 718 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 CES5AQ6NT32 575 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ERAP2Q6P179 960 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 PRSS55Q6UWB4 352 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SCD5Q86SK9 330 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ZNF540Q8NDQ6 660 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 OR2T11Q8NH01 316 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 DNAJB8Q8NHS0 232 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 PIK3R3Q92569 461 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ZNF382Q96SR6 550 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 CDK5RAP1Q96SZ6 601 aaKnown RBP18.61■□□□□ 0.57
CMTM3-201ENST00000361909 AARSD1Q9BTE6 412 aaKnown RBP18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SLC39A8Q9C0K1 460 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ATXN3LQ9H3M9 355 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SLA2Q9H6Q3 261 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 MARCH4Q9P2E8 410 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-201ENST00000361909 PCTPQ9UKL6 214 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 NEUROG3Q9Y4Z2 214 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 TIMM22Q9Y584 194 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 GBF1Q92538 1859 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ZW10O43264 779 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 FAM20BO75063 409 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 VNN2O95498 520 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SLC4A1P02730 911 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 FTH1P02794 183 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SEPHS1P49903 392 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 TIAL1Q01085 375 aaKnown RBP eCLIP18.61■□□□□ 0.57
CMTM3-201ENST00000361909 CYP4F3Q08477 520 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 FAM209AQ5JX71 171 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ZNF549Q6P9A3 640 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 GPRIN3Q6ZVF9 776 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 GPR65Q8IYL9 337 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SETD6Q8TBK2 473 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 FRS2Q8WU20 508 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 PDLIM5Q96HC4 596 aaKnown RBP18.61■□□□□ 0.57
CMTM3-201ENST00000361909 ZBTB18Q99592 522 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 SPG21Q9NZD8 308 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 PRKAG2Q9UGJ0 569 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 N6AMT1Q9Y5N5 214 aa18.61■□□□□ 0.57
CMTM3-201ENST00000361909 FAM220BPB1ANY3 271 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 AIREO43918 545 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 FMO3P31513 532 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 DDOSTP39656 456 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 ARHGDIAP52565 204 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 PCSK7Q16549 785 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 MANEALQ5VSG8 457 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 DDX53Q86TM3 631 aaKnown RBP18.6■□□□□ 0.57
CMTM3-201ENST00000361909 TAC4Q86UU9 113 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 TSPYL5Q86VY4 417 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-201ENST00000361909 ANGPTL6Q8NI99 470 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 RNF34Q969K3 372 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 RNF38Q9H0F5 515 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 RIMKLBQ9ULI2 386 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 CRYL1Q9Y2S2 319 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 MRPL42Q9Y6G3 142 aaKnown RBP18.6■□□□□ 0.57
CMTM3-201ENST00000361909 MYO16Q9Y6X6 1858 aa18.6■□□□□ 0.57
CMTM3-201ENST00000361909 FAM25AB3EWG3 89 aa18.59■□□□□ 0.57
CMTM3-201ENST00000361909 FAM25CB3EWG5 89 aa18.59■□□□□ 0.57
CMTM3-201ENST00000361909 FAM25GB3EWG6 89 aa18.59■□□□□ 0.57
CMTM3-201ENST00000361909 FGBP02675 491 aa18.59■□□□□ 0.57
CMTM3-201ENST00000361909 SPNP16150 400 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms