RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MBOAT1Q6ZNC8 495 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ITIH5Q86UX2 942 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 RAB42Q8N4Z0 105 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 XAGE5Q8WWM1 108 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 COL26A1Q96A83 441 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PYURFQ96I23 114 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 YME1L1Q96TA2 773 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 C14orf119Q9NWQ9 140 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 KCTD5Q9NXV2 234 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PCDHGA8Q9Y5G5 932 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 H0YAE9 185 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PTGESO14684 152 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 NR2F1P10589 423 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PAX3P23760 479 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 HTR1EP28566 365 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ATP4BP51164 291 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 TUBA3CQ13748 450 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 RFTN2Q52LD8 501 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 CLEC14AQ86T13 490 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 CACTIN-AS1Q8N1I8 211 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 OR5AK3PQ8NH89 298 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 UROC1Q96N76 676 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ZNF641Q96N77 438 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ZNF599Q96NL3 588 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 HEPHQ9BQS7 1158 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 AGPAT4Q9NRZ5 378 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 SLC1A7O00341 560 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 GPR39O43194 453 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 GKP32189 559 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 MAGEA10P43363 369 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 OR1E2P47887 323 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 SNRPD1P62314 119 aaKnown RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PHC1P78364 1004 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 FPGSQ05932 587 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 C2orf80Q0P641 193 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ANGPT1Q15389 498 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 CYP2U1Q7Z449 544 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 OR10T2Q8NGX3 314 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 STARD8Q92502 1023 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 TMEM125Q96AQ2 219 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 EHD1Q9H4M9 534 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 THUMPD1Q9NXG2 353 aaKnown RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ANGPT4Q9Y264 503 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PEX16Q9Y5Y5 336 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 DOCK2Q92608 1830 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 A0A1B0GVM2 712 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 GABBR2O75899 941 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 CSF2P04141 144 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 MATN1P21941 496 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 MAPKAPK2P49137 400 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 CSNK2BP67870 215 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PTSQ03393 145 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 SCAPQ12770 1279 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 SETMARQ53H47 684 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 RGMBQ6NW40 437 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PRSS55Q6UWB4 352 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 OR10G2Q8NGC3 310 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 BEX2Q9BXY8 128 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ADAMTS5Q9UNA0 930 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ZNF195O14628 629 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 TSPAN9O75954 239 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 VIPP01282 170 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 KCNC1P48547 511 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 RGL4Q8IZJ4 473 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ZMIZ2Q8NF64 920 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 AHSPQ9NZD4 102 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PTGFRNQ9P2B2 879 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ZNF222Q9UK12 451 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 KRBA1A5PL33 1030 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 TMX2-CTNND1H3BSU7 103 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ZW10O43264 779 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 C9P02748 559 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PRPS2P11908 318 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 IFI30P13284 250 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 NOS3P29474 1203 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 UGT2B15P54855 530 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 HKDC1Q2TB90 917 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PIK3R6Q5UE93 754 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ERICH5Q6P6B1 374 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 KAT2AQ92830 837 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 POLR2J2Q9GZM3 115 aaKnown RBP13.59□□□□□ -0.23
COL6A1-201ENST00000361866 SP140LQ9H930 580 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 NKIRAS2Q9NYR9 191 aa13.59□□□□□ -0.23
COL6A1-201ENST00000361866 ANKRD36CQ5JPF3 1778 aa13.58□□□□□ -0.23
COL6A1-201ENST00000361866 FZD9O00144 591 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 GJB3O75712 270 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 PAPSS2O95340 614 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms