RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FAM174BQ3ZCQ3 159 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 PAQR3Q6TCH7 311 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 RIMKLAQ8IXN7 391 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 C2CD4AQ8NCU7 369 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 C12orf42Q96LP6 360 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 TMEM209Q96SK2 561 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 DHRS9Q9BPW9 319 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 SLC30A2Q9BRI3 323 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 KCNH4Q9UQ05 1017 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 CLCA3PQ9Y6N3 262 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 IQCF5A8MTL0 148 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 F9P00740 461 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 AQP1P29972 269 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CREMQ03060 361 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 EMX2Q04743 252 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 TSTA3Q13630 321 aaPredicted RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PTCHD3Q3KNS1 767 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 FAM131AQ6UXB0 335 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 VANGL1Q8TAA9 524 aaPredicted RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CDADC1Q9BWV3 514 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 AGO3Q9H9G7 860 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 OSGIN1Q9UJX0 560 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PEX16Q9Y5Y5 336 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 TRAV19A0A0A6YYK7 116 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 TYW5A2RUC4 315 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PABPN1LA6NDY0 278 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 SOCS7O14512 581 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 NUPL2O15504 423 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 SNX4O95219 450 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 SLC25A27O95847 323 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 ITGB1P05556 798 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PGRP06401 933 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 STSP08842 583 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 POU1F1P28069 291 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PNPLA4P41247 253 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 ATP4BP51164 291 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CRISP3P54108 245 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 RCAN2Q14206 197 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 NFE2L1Q14494 772 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PTPRNQ16849 979 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CDONQ4KMG0 1287 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 KCTD11Q693B1 232 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PAQR9Q6ZVX9 377 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 C16orf62Q7Z3J2 963 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 OR52J3Q8NH60 311 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 KCNN3Q9UGI6 736 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 EIF2B4Q9UI10 523 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 GLTPD2A6NH11 291 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 H3BM21 787 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 KIAA0513O60268 411 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CELF2O95319 508 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 POU2F1P14859 743 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CD6P30203 668 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CCT3P49368 545 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 INPP1P49441 399 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CLCN5P51795 746 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 NKX3-2P78367 333 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 SLC35A2P78381 396 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 FAM189BP81408 668 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 MRPL28Q13084 256 aaKnown RBP12.42□□□□□ -0.42
VAMP1-201ENST00000361716 LCP2Q13094 533 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PDZK1Q5T2W1 519 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 SLX4IPQ5VYV7 408 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PLEKHM3Q6ZWE6 761 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 CEP68Q76N32 757 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 PHC2Q8IXK0 858 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 MUC13Q9H3R2 512 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 GPR83Q9NYM4 423 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 LYVE1Q9Y5Y7 322 aa12.42□□□□□ -0.42
VAMP1-201ENST00000361716 M0QZ92 97 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 GPR39O43194 453 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 ERN1O75460 977 aaKnown RBP12.41□□□□□ -0.42
VAMP1-201ENST00000361716 OR2B3O76000 313 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 GRK5P34947 590 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 CYP4F8P98187 520 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 PTPRRQ15256 657 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 STK11Q15831 433 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 CYP27C1Q4G0S4 372 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 GLCCI1Q86VQ1 547 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 NLRP8Q86W28 1048 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 SPATA2LQ8IUW3 424 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-201ENST00000361716 SIMC1Q8NDZ2 872 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 HMCESQ96FZ2 354 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 IKZF5Q9H5V7 419 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 A0A0G2JMP0 313 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 HNRNPCL2B2RXH8 293 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
VAMP1-201ENST00000361716 PSMD3O43242 534 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 EEDO75530 441 aaKnown RBP12.41□□□□□ -0.42
VAMP1-201ENST00000361716 LRATO95237 230 aa12.41□□□□□ -0.42
VAMP1-201ENST00000361716 TP53P04637 393 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-201ENST00000361716 THP07101 528 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms