RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SYVN1Q86TM6 617 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 PPCDCQ96CD2 204 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 COPS8Q99627 209 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 ACAT2Q9BWD1 397 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 OSBPL2Q9H1P3 480 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 MRM3Q9HC36 420 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 DCLK1O15075 740 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 PRKCGP05129 697 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 IL7P13232 177 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 RPL9P32969 192 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 ATP5C1P36542 298 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 PTGER3P43115 390 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 AGTR2P50052 363 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 PRKAG1P54619 331 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 SUZ12Q15022 739 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 BTBD16Q32M84 506 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 ZNF534Q76KX8 674 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 TMEM203Q969S6 136 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 KLHL31Q9H511 634 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 MBD2Q9UBB5 411 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 UBE2QL1A1L167 161 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 IRAK2O43187 625 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 GUCY1B2O75343 617 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 S100A9P06702 114 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 CRHBPP24387 322 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 GALNT1Q10472 559 aaPredicted RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 AMIGO1Q86WK6 493 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 CDK20Q8IZL9 346 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 OR13F1Q8NGS4 319 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 GANCQ8TET4 914 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 TMEM125Q96AQ2 219 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 DERL2Q9GZP9 239 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 SDR39U1Q9NRG7 319 aaPredicted RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 CLEC4AQ9UMR7 237 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 PRKAB1Q9Y478 270 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 SPIN1Q9Y657 262 aaPredicted RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 HMX2A2RU54 273 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 ENPP6Q6UWR7 440 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 DDX53Q86TM3 631 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 FRS2Q8WU20 508 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 MROQ9BYG7 248 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 DNAJC11Q9NVH1 559 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 RGPD5Q99666 1765 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 IRGMA1A4Y4 181 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 C12orf71A8MTZ7 269 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CXCL11O14625 94 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 MATN4O95460 622 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 IGSF6O95976 241 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 NR2F1P10589 423 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ENGP17813 658 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ASMTP46597 345 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 DCDC1P59894 354 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ZNF33AQ06730 810 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 IL10RBQ08334 325 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 VGLL4Q14135 290 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 NDUFAF6Q330K2 333 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 DCST1Q5T197 706 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 FAM171A1Q5VUB5 890 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CXXC5Q7LFL8 322 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ELMOD1Q8N336 334 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 MEIOBQ8N635 442 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ZBTB2Q8N680 514 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 LILRB4Q8NHJ6 448 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ASPNQ9BXN1 380 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 RRAGCQ9HB90 399 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PHF11Q9UIL8 331 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 POFUT2Q9Y2G5 429 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 MAGED1Q9Y5V3 778 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 COL1A2P08123 1366 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 HTR2BP41595 481 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 RPP38P78345 283 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ST3GAL4Q11206 333 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PTGR1Q14914 329 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PLEKHH3Q7Z736 793 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ITIH5Q86UX2 942 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ZNF614Q8N883 585 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 HJURPQ8NCD3 748 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ACVR1CQ8NER5 493 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 POF1BQ8WVV4 589 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 KCTD13Q8WZ19 329 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 LRCH3Q96II8 777 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 HSH2DQ96JZ2 352 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ATG10Q9H0Y0 220 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 MAP4K5Q9Y4K4 846 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CDRT1O95170 752 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 EGFRP00533 1210 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 ANXA4P09525 319 aaPredicted RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 CD1DP15813 335 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 GPX3P22352 226 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 RFX3P48380 749 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 RAPSNQ13702 412 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 AGAP7PQ5VUJ5 663 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 OR4F3Q6IEY1 312 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PNCKQ6P2M8 343 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 USP45Q70EL2 814 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PDLIM7Q9NR12 457 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 MIOSQ9NXC5 875 aa15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 GMPR2Q9P2T1 348 aaKnown RBP15.63■□□□□ 0.09
CLSTN1-201ENST00000361311 PHRF1Q9P1Y6 1649 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms