RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 PORP16435 677 aaPredicted RBP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 MAGEA8P43361 318 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 MAGEA11P43364 429 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 CD97P48960 835 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 ISL1P61371 349 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 RPS14P62263 151 aaKnown RBP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 PRKCZQ05513 592 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 CDH18Q13634 790 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 BOP1Q14137 746 aaKnown RBP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 PCBP2Q15366 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 INAQ16352 499 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 SPATS1Q496A3 300 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 RFLNAQ6ZTI6 216 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 CYP4Z1Q86W10 505 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 OR5K1Q8NHB7 308 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 RHBDF1Q96CC6 855 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 HERC2P3Q9BVR0 1158 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 CD244Q9BZW8 370 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 MIR1-1HGQ9H1L0 117 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 PDP1Q9P0J1 537 aaPredicted RBP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 GMPPBQ9Y5P6 360 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 A0A1B0GVM2 712 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 RFXANKO14593 260 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 FAM20BO75063 409 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 F11P03951 625 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
CLIP3-201ENST00000360535 GPR17Q13304 367 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 TPGS1Q6ZTW0 290 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 AHSA2Q719I0 299 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 WFDC5Q8TCV5 224 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 C1orf109Q9NX04 203 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 CD84Q9UIB8 345 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 ZNF232Q9UNY5 417 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 GBF1Q92538 1859 aa11.85□□□□□ -0.51
CLIP3-201ENST00000360535 ILVBLA1L0T0 632 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 IFRD1O00458 451 aaPredicted RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 SEPT4O43236 478 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 COQ9O75208 318 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 STK16O75716 305 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 CD160O95971 181 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 COL6A1P12109 1028 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ITGALP20701 1170 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 DGKAP23743 735 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 CSKP41240 450 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 HALP42357 657 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 RPIAP49247 311 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 KIAA0040Q15053 153 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 RUNDC3AQ59EK9 446 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 Q6ZPB1 254 aaPredicted RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 SLC16A12Q6ZSM3 486 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 HORMAD1Q86X24 394 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 STK40Q8N2I9 435 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ZCCHC7Q8N3Z6 543 aaKnown RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ZBTB2Q8N680 514 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 MYO19Q96H55 970 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ACPTQ9BZG2 426 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 GORASP2Q9H8Y8 452 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 IL26Q9NPH9 171 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 INIPQ9NRY2 104 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 DCAF13Q9NV06 445 aaKnown RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 GNPTGQ9UJJ9 305 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ZNF229Q9UJW7 825 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 PCDHB7Q9Y5E2 793 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 TET1Q8NFU7 2136 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 OR6C75A6NL08 312 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 TBKBP1A7MCY6 615 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 SLC28A1O00337 649 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 KDM1AO60341 852 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 SCELO95171 688 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 IL6P05231 212 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ABCB1P08183 1280 aaPredicted RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 HPCAL1P37235 193 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 TMED10P49755 219 aaKnown RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 CLCN4P51793 760 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ARHGDIAP52565 204 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 NCEH1Q6PIU2 408 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 TMEM132CQ8N3T6 1108 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 DBF4BQ8NFT6 615 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 PSMA8Q8TAA3 256 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ELMO1Q92556 727 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 HPS1Q92902 700 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 PYURFQ96I23 114 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 SH3GL1Q99961 368 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 NEURL2Q9BR09 285 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 P2RY12Q9H244 342 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 KAT8Q9H7Z6 458 aaKnown RBP11.84□□□□□ -0.51
CLIP3-201ENST00000360535 RIMKLBQ9ULI2 386 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 DYTNA2CJ06 578 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 KRBA1A5PL33 1030 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 TRIM43BA6NCK2 446 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 SYN3O14994 580 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 ADAMTS4O75173 837 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 WDR47O94967 919 aa11.84□□□□□ -0.51
CLIP3-201ENST00000360535 MT-ND2P03891 347 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms