RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 DDIASQ8IXT1 998 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 RAVER1Q8IY67 606 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 MRGPRX1Q96LB2 322 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 MRPL1Q9BYD6 325 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 PCDHAC1Q9H158 963 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 EIF2B4Q9UI10 523 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 KPNA5O15131 536 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 NDUFV2P19404 249 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 ME2P23368 584 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 MMP12P39900 470 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 RXRGP48443 463 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 ZXDAP98168 799 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 LRRC32Q14392 662 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 PIP5KL1Q5T9C9 394 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 IL23RQ5VWK5 629 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 SULT1C3Q6IMI6 304 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 OGFOD2Q6N063 350 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 TTC23LQ6PF05 361 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 C16orf87Q6PH81 154 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 KIAA1324Q6UXG2 1013 aaKnown RBP13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 B3GNT6Q6ZMB0 384 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 SPATA19Q7Z5L4 167 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 PHYKPLQ8IUZ5 450 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 HDDC3Q8N4P3 179 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 TRAM1L1Q8N609 369 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 PJA1Q8NG27 643 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 GANCQ8TET4 914 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 HMGB4Q8WW32 186 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 KCNA7Q96RP8 456 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 SLC25A23Q9BV35 468 aa13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.24
CSNK1E-201ENST00000359867 USP34Q70CQ2 3546 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 CFAP99D6REC4 459 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 H3BSA7 217 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 SNRPB2P08579 225 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 ATP1B2P14415 290 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 MRPL19P49406 292 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 RALGDSQ12967 914 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 AGKQ53H12 422 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 TJAP1Q5JTD0 557 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 HSD11B1LQ7Z5J1 315 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 HMGCLL1Q8TB92 370 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 UBTD2Q8WUN7 234 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 SIPA1Q96FS4 1042 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 HHIPQ96QV1 700 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 FBXL12Q9NXK8 326 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 ZNF225Q9UK10 706 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 TMPRSS11EQ9UL52 423 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 RAB26Q9ULW5 256 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
CSNK1E-201ENST00000359867 TECTAO75443 2155 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 A0A1B0GTL3 188 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 AP2A2O94973 939 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 TNFAIP8O95379 198 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 ADH1BP00325 375 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 DNTTP04053 509 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 FAM58BPP0C7Q3 252 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GABRG2P18507 467 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 C5AR1P21730 350 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 AOAHP28039 575 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GBX1Q14549 363 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 AGBL4Q5VU57 503 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 ERAP2Q6P179 960 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 FAM124AQ86V42 546 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 ZSCAN5AQ9BUG6 496 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 FAIMQ9NVQ4 179 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 POLG2Q9UHN1 485 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 CD84Q9UIB8 345 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 COQ6Q9Y2Z9 468 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 PLXNB3Q9ULL4 1909 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 PRR23AA6NEV1 266 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 PSMD11O00231 422 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 SERPINB7O75635 380 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 ALDOCP09972 364 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 LINC00032P0C843 101 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 PRR35P0CG20 571 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 MPC1LP0DKB6 136 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GPX3P22352 226 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 SH3BGRP55822 239 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 TAS2R38P59533 333 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GRIK2Q13002 908 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 CLPPQ16740 277 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 XKR7Q5GH72 579 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 PLEKHS1Q5SXH7 462 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 LAYNQ6UX15 382 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 GOLGA7Q7Z5G4 137 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 TICAM1Q8IUC6 712 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 ESAMQ96AP7 390 aa13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 UHRF1Q96T88 793 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 MRPS26Q9BYN8 205 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-201ENST00000359867 LIN28AQ9H9Z2 209 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms