RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SLC6A12P48065 614 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 RPL6Q02878 288 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 CSTF1Q05048 431 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 BTKQ06187 659 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 TUBB3Q13509 450 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 SLC9B1Q4ZJI4 515 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 SPDYAQ5MJ70 313 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 CLEC6AQ6EIG7 209 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 ABI3BPQ7Z7G0 1075 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 MTDHQ86UE4 582 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 LONP2Q86WA8 852 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 CHCHD4Q8N4Q1 142 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 FAM160A2Q8N612 972 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 FITM2Q8N6M3 262 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 SNX31Q8N9S9 440 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 OSGEPL1Q9H4B0 414 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 IPPKQ9H8X2 491 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 CARS2Q9HA77 564 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 MEAF6Q9HAF1 191 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 TNFRSF12AQ9NP84 129 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 PFDN4Q9NQP4 134 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 TM7SF3Q9NS93 570 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 KLC4Q9NSK0 619 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 DNAJC11Q9NVH1 559 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 TRIM33Q9UPN9 1127 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 A0A1W2PPC4 97 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 METTL12A8MUP2 240 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 MEI4A8MW99 385 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 MYO1CO00159 1063 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 PPP6CO00743 305 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 SDHDO14521 159 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 OR7A17O14581 309 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 UBOX5O94941 541 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 OR4F21O95013 312 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 FUCA1P04066 466 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 UROSP10746 265 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 IDSP22304 550 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 GDF5P43026 501 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 CLCNKAP51800 687 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 PTK2BQ14289 1009 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 PTCHD3Q3KNS1 767 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 METTL21CQ5VZV1 264 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 FAM91A1Q658Y4 838 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 DCUN1D3Q8IWE4 304 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 KLHDC8AQ8IYD2 350 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 OR9A1PQ8NGU1 263 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 TWIST2Q8WVJ9 160 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 OR1E3Q8WZA6 343 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 TFGQ92734 400 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 NELL1Q92832 810 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 MAELQ96JY0 434 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 PKP4Q99569 1192 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 EBF2Q9HAK2 575 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 STOX2Q9P2F5 926 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 TRPS1Q9UHF7 1281 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 FBXO4Q9UKT5 387 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 KCNK6Q9Y257 313 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 ASF1AQ9Y294 204 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 PCDHGA2Q9Y5H1 932 aa13.46□□□□□ -0.25
PDLIM5-203ENST00000359265 GOLGA8QA0A0J9YX86 632 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 GOLGA8OA6NCC3 632 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 GOLGA8NF8WBI6 632 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 EBLN1P0CF75 366 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 CD27P26842 260 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 IMPA1P29218 277 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 HMOX2P30519 316 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 HNRNPH2P55795 449 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 TRAF3Q13114 568 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 LRP8Q14114 963 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 TBCCQ15814 346 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 LPAL2Q16609 132 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 LACTB2Q53H82 288 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 AGTRAPQ6RW13 159 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 TSSK4Q6SA08 328 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 Q6ZSR6 202 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 MILR1Q7Z6M3 343 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 CLNKQ7Z7G1 428 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 FRMD1Q8N878 549 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 KDF1Q8NAX2 398 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 OR13H1Q8NG92 308 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 OR52B6Q8NGF0 335 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 ACTRT2Q8TDY3 377 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 RAD51AP1Q96B01 352 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 C19orf60Q96EN9 201 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 PPP1R36Q96LQ0 422 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 MAGEB10Q96LZ2 347 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 OR52B2Q96RD2 323 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 KCNA7Q96RP8 456 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 NTMT1Q9BV86 223 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 NMUR2Q9GZQ4 415 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 ATG10Q9H0Y0 220 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms