RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 CATSPER2Q96P56 530 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 LGR4Q9BXB1 951 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 TUBB1Q9H4B7 451 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ACTR8Q9H981 624 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 STOX2Q9P2F5 926 aaPredicted RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 POLG2Q9UHN1 485 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 TIMM22Q9Y584 194 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 COPG1Q9Y678 874 aaKnown RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 DYTNA2CJ06 578 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 NPIPB8E9PQR5 432 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
CCDC197-201ENST00000359253 CLGNO14967 610 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 LATO43561 262 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 KDM1AO60341 852 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 SEMA4FO95754 770 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 CEACAM5P06731 702 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 LINC00032P0C843 101 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 TDGF1P13385 188 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 HNF4AP41235 474 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 CASP2P42575 452 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 GDF5P43026 501 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 CLCNKAP51800 687 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 PFN3P60673 137 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 ERVK-8P63133 956 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 MXRA7P84157 204 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 EMX2Q04743 252 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 TCF15Q12870 199 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 RIPK1Q13546 671 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 NFE2L1Q14494 772 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 C18orf21Q32NC0 220 aaPredicted RBP13.12□□□□□ -0.31
CCDC197-201ENST00000359253 ATP6AP1LQ52LC2 224 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 FBXO48Q5FWF7 155 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.12□□□□□ -0.31
CCDC197-201ENST00000359253 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 THOC6Q86W42 341 aaKnown RBP13.12□□□□□ -0.31
CCDC197-201ENST00000359253 LONP2Q86WA8 852 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 GALNT13Q8IUC8 556 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 DCUN1D3Q8IWE4 304 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 TBC1D21Q8IYX1 336 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 FAM9CQ8IZT9 166 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 USP7Q93009 1102 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
CCDC197-201ENST00000359253 C3orf30Q96M34 536 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 KCNA7Q96RP8 456 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 PKP4Q99569 1192 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 MIPEPQ99797 713 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 ZDHHC5Q9C0B5 715 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 PCED1AQ9H1Q7 454 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 SLC6A17Q9H1V8 727 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 SLC22A14Q9Y267 594 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 OR1A2Q9Y585 309 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 PCDHGA2Q9Y5H1 932 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 KCNE2Q9Y6J6 123 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 CACNA1IQ9P0X4 2223 aa13.12□□□□□ -0.31
CCDC197-201ENST00000359253 PRR23AA6NEV1 266 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 BBIP1A8MTZ0 92 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 SLC31A1O15431 190 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 RASSF9O75901 435 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 KRT16P08779 473 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 JUPP14923 745 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 GNAZP19086 355 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 IDSP22304 550 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 IMPA1P29218 277 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 KCNJ2P63252 427 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 E2F2Q14209 437 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 PTK2BQ14289 1009 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 FASTKQ14296 549 aaKnown RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 NFATC4Q14934 902 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 PYCR3Q53H96 274 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 ZC3H14Q6PJT7 736 aaKnown RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 DOK6Q6PKX4 331 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 IL27RAQ6UWB1 636 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 XKR5Q6UX68 686 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 C16orf89Q6UX73 402 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 MBOAT1Q6ZNC8 495 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 RINLQ6ZS11 566 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 MIER2Q8N344 545 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 OR5K2Q8NHB8 316 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 TFGQ92734 400 aaPredicted RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 SLC25A23Q9BV35 468 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 PCBD2Q9H0N5 130 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 TRIT1Q9H3H1 467 aaKnown RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 EHD1Q9H4M9 534 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 SLC40A1Q9NP59 571 aa13.11□□□□□ -0.31
CCDC197-201ENST00000359253 SDR39U1Q9NRG7 319 aaPredicted RBP13.11□□□□□ -0.31
CCDC197-201ENST00000359253 FAM8A1Q9UBU6 413 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms