RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 RHBDF1Q96CC6 855 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 PPP3R2Q96LZ3 170 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 YTHDF1Q9BYJ9 559 aaKnown RBP13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 TRIM8Q9BZR9 551 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 NANOGQ9H9S0 305 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 SMOXQ9NWM0 555 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 KLHL42Q9P2K6 505 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 RSL24D1Q9UHA3 163 aaKnown RBP13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 ZNF639Q9UID6 485 aa13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 POLR3HQ9Y535 204 aaPredicted RBP13.96□□□□□ -0.18
NIPAL3-203ENST00000358028 KMT2EQ8IZD2 1858 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 RNF103-CHMP3A0A140T963 221 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 MYOCOSA0A1B0GUC4 107 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 K7EPI3 171 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 DLGAP1O14490 977 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 ACOX3O15254 700 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 TULP3O75386 442 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 LDLRP01130 860 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 C1SP09871 688 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 G6PDP11413 515 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 LHCGRP22888 699 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 JAK1P23458 1154 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 OXTRP30559 389 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 GDI1P31150 447 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 CASP2P42575 452 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 PTSQ03393 145 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 SIGLEC14Q08ET2 396 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 FCHO2Q0JRZ9 810 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 ZNF77Q15935 545 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 SLC2A7Q6PXP3 512 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 TMEM25Q86YD3 366 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 FAM110BQ8TC76 370 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 BPIFB1Q8TDL5 484 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 ULK4Q96C45 1275 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 HBEGFQ99075 208 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 COPS8Q99627 209 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 TRMT61BQ9BVS5 477 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 SLC2A4RGQ9NR83 387 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 TRPS1Q9UHF7 1281 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 CCL27Q9Y4X3 112 aa13.95□□□□□ -0.18
NIPAL3-203ENST00000358028 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 SLC28A1O00337 649 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 RGS14O43566 566 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 WDR47O94967 919 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 POP4O95707 220 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 GDF5P43026 501 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ESRRGP62508 458 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 B4GALNT1Q00973 533 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 MAD2L1Q13257 205 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ATP13A5Q4VNC0 1218 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ZDHHC20Q5W0Z9 365 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 TTC33Q6PID6 262 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ISLR2Q6UXK2 745 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 DPY19L3Q6ZPD9 716 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ERI1Q8IV48 349 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 OR8J3Q8NGG0 315 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 BDH2Q9BUT1 245 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ACTL8Q9H568 366 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 BRD9Q9H8M2 597 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 INTS7Q9NVH2 962 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 SLAMF8Q9P0V8 285 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 OAZ3Q9UMX2 235 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 AP3M1Q9Y2T2 418 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 PIEZO1Q92508 2521 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 A0A1W2PQ67 120 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ANKRD33BA6NCL7 494 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 NEDD8-MDP1E9PL57 170 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 PLOD2O00469 737 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 ANKRD28O15084 1053 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 UGT2B4P06133 528 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 EBLN1P0CF75 366 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 PABPC1P11940 636 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 CDH1P12830 882 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 CAPGP40121 348 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 PWP1Q13610 501 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 TTC23LQ6PF05 361 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 RFLNAQ6ZTI6 216 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 BIRC7Q96CA5 298 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 FAM122AQ96E09 287 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 NSMCE2Q96MF7 247 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 TMEM74Q96NL1 305 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 NTMT1Q9BV86 223 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 SMPD3Q9NY59 655 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 B4GALT6Q9UBX8 382 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 CA14Q9ULX7 337 aa13.94□□□□□ -0.18
NIPAL3-203ENST00000358028 H3BSA7 217 aa13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 EIF3FO00303 357 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 FFAR3O14843 346 aa13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 GPR42O15529 346 aa13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 TRMUO75648 421 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 OR56A5P0C7T3 313 aa13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 MTHFD1P11586 935 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-203ENST00000358028 SLC2A4P14672 509 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms