RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 AFTPHQ6ULP2 937 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 NLGN4XQ8N0W4 816 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 PAF1Q8N7H5 531 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 DNASE1L2Q92874 299 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 PYURFQ96I23 114 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TPD52L3Q96J77 140 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 DMRTB1Q96MA1 342 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 Q96MT0 163 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 KCNC2Q96PR1 638 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 CTRCQ99895 268 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 REXO4Q9GZR2 422 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 DUSP21Q9H596 190 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 CCSER2Q9H7U1 834 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 RMND5AQ9H871 391 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 USE1Q9NZ43 259 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 MARCH2Q9P0N8 246 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 OPTCQ9UBM4 332 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SAMHD1Q9Y3Z3 626 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SNX8Q9Y5X2 465 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 CBX4O00257 560 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 RAD51BO15315 384 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 STX7O15400 261 aaKnown RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 AIREO43918 545 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 RFPL2O75678 378 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 UPK1BO75841 260 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 PRLP01236 227 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 COL6A1P12109 1028 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 TWF1Q12792 350 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 RUNDC3AQ59EK9 446 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 FAM171A1Q5VUB5 890 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 RSBN1Q5VWQ0 802 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 NADSYN1Q6IA69 706 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 THEM5Q8N1Q8 247 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 SLC10A4Q96EP9 437 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 OR51E2Q9H255 320 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 POPDC3Q9HBV1 291 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 NECTIN3Q9NQS3 549 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 C1orf109Q9NX04 203 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 NAALAD2Q9Y3Q0 740 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 C2orf81A6NN90 581 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 SLC16A6O15403 523 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 TAPBPO15533 448 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 ASNA1O43681 348 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 KLK8O60259 260 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 PRAMEF11O60813 436 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 MFN2O95140 757 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 ALPIP09923 528 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 TNFRSF1BP20333 461 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 TGFBR2P37173 567 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 SYT6Q5T7P8 510 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 SBSNQ6UWP8 590 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 CXCL17Q6UXB2 119 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 FAM151BQ6UXP7 276 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 CCDC80Q76M96 950 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 VASH1Q7L8A9 365 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 GPR149Q86SP6 731 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 LRRC49Q8IUZ0 686 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 TADA1Q96BN2 335 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 REXO5Q96IC2 774 aaKnown RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 RDH12Q96NR8 316 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 CHCHD6Q9BRQ6 235 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 CINPQ9BW66 212 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 CIPCQ9C0C6 399 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 HOXD1Q9GZZ0 328 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 TRMT13Q9NUP7 481 aaKnown RBP9.9□□□□□ -0.82
PTPRA-203ENST00000356147 WWOXQ9NZC7 414 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 SNX6Q9UNH7 406 aa9.9□□□□□ -0.82
PTPRA-203ENST00000356147 ULK1O75385 1050 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 NPPAP01160 153 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 HOXA9P31269 272 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 RYKP34925 604 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 RACK1P63244 317 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 TAF10Q12962 218 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ACOX1Q15067 660 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 FAM214AQ32MH5 1076 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CYP27C1Q4G0S4 372 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 THOC7Q6I9Y2 204 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CCBE1Q6UXH8 406 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 C16orf59Q7L2K0 433 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 FBXO32Q969P5 355 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ULK4Q96C45 1275 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 TRIB3Q96RU7 358 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 EBPLQ9BY08 206 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 LRTM1Q9HBL6 345 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 KRT84Q9NSB2 600 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CCL27Q9Y4X3 112 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 PCDHGA3Q9Y5H0 932 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CCL15-CCL14A0A0B4J2E2 113 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 WASH4PA8MWX3 477 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 FAM47E-STBD1D6RA91 191 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 M0QZ92 97 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 SCELO95171 688 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 BCKDHAP12694 445 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ACVR2AP27037 513 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 MAD2L1BPQ15013 274 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 PCBP1Q15365 356 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CCL15Q16663 113 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF404Q494X3 552 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 PTRHD1Q6GMV3 140 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 OR4F3Q6IEY1 312 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms