RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SH3BP2P78314 561 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 ARF5P84085 180 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 INTS11Q5TA45 600 aaKnown RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 OTUD1Q5VV17 481 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PM20D1Q6GTS8 502 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PGBD2Q6P3X8 592 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 CYP4Z1Q86W10 505 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 ASB12Q8WXK4 309 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 NSUN3Q9H649 340 aaKnown RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MTMR11A4FU01 709 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 PRORSD1PA6NEY8 169 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF487B1APH4 448 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 FAM214AQ32MH5 1076 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 FAM174BQ3ZCQ3 159 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 RTP2Q5QGT7 225 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 ERAP2Q6P179 960 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 ZDHHC21Q8IVQ6 265 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 PIGKQ92643 395 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 IL12RB2Q99665 862 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 BARD1Q99728 777 aaKnown RBP13.77□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF490Q9ULM2 529 aaPredicted RBP13.77□□□□□ -0.2
SREBF1-202ENST00000355815 USP3Q9Y6I4 520 aa13.77□□□□□ -0.2
SREBF1-202ENST00000355815 FABP12A6NFH5 140 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 BBIP1A8MTZ0 92 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 KDM4BO94953 1096 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 GNAO1P09471 354 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 MAGEA3P43357 314 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 MAP2K4P45985 399 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 ATP6V0D1P61421 351 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 SCAPQ12770 1279 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 PLA2G4EQ3MJ16 856 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 HSF5Q4G112 596 aaPredicted RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 TECRLQ5HYJ1 363 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 DOK6Q6PKX4 331 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 TRMT11Q7Z4G4 463 aaKnown RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 STK40Q8N2I9 435 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 C10orf53Q8N6V4 93 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 PHOX2BQ99453 314 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 BEX1Q9HBH7 125 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 PRAMEF33A0A0G2JMD5 474 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 SOCS2O14508 198 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 AP3D1O14617 1153 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 PRAMEF10O60809 474 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 PRDX3P30048 256 aaKnown RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 MAPK12P53778 367 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 SNRPD2P62316 118 aaKnown RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 ELP6Q0PNE2 266 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 SH2D5Q6ZV89 423 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 TIGD4Q8IY51 512 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 Q8N9G6 341 aaPredicted RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 ASCC1Q8N9N2 400 aaKnown RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 LRRC58Q96CX6 371 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 IMP4Q96G21 291 aaKnown RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 NAA50Q9GZZ1 169 aaKnown RBP13.77□□□□□ -0.21
SREBF1-202ENST00000355815 MED28Q9H204 178 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 RNF186Q9NXI6 227 aa13.77□□□□□ -0.21
SREBF1-202ENST00000355815 GSAPA4D1B5 854 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 NR2F6P10588 404 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 TCF3P15923 654 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 EPORP19235 508 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 DGKAP23743 735 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 SERPINA4P29622 427 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 INHBCP55103 352 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 TUBA4AP68366 448 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 PSAPL1Q6NUJ1 521 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF517Q6ZMY9 492 aaPredicted RBP13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ASB18Q6ZVZ8 466 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 PTERQ96BW5 349 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ZSCAN5AQ9BUG6 496 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 MFSD1Q9H3U5 465 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 MKS1Q9NXB0 559 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 RPS6KA6Q9UK32 745 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 VPS4AQ9UN37 437 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 BAIAP2Q9UQB8 552 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 KRBA1A5PL33 1030 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 HOXA2O43364 376 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CA12O43570 354 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CLDN7O95471 211 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 IGSF6O95976 241 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 SELPP16109 830 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 NFATC3Q12968 1075 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 SERINC3Q13530 473 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 OR4D1Q15615 310 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CYS1Q717R9 158 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 GALNT6Q8NCL4 622 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 C3orf30Q96M34 536 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 TSGA13Q96PP4 275 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 EBPLQ9BY08 206 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 SUV39H1O43463 412 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 DHFRP00374 187 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ANXA5P08758 320 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 OPRL1P41146 370 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms