RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 AARS2Q5JTZ9 985 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 C1orf189Q5VU69 101 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 ZNF549Q6P9A3 640 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 CNSTQ6PJW8 725 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 DCUN1D3Q8IWE4 304 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 OTUD6BQ8N6M0 293 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 ZNF669Q96BR6 464 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 SIGLEC10Q96LC7 697 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 TTC1Q99614 292 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 SLC22A11Q9NSA0 550 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 HEMK1Q9Y5R4 338 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 ARGFXA6NJG6 315 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 E7EQ34 232 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 RASGRF2O14827 1237 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 PHF2O75151 1096 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 MED26O95402 600 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 S1PR4O95977 384 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 SFTPCP11686 197 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 MCM3P25205 808 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 GRIA3P42263 894 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 PMS2P54278 862 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 PLOD1Q02809 727 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 TLE1Q04724 770 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 KIR2DS3Q14952 304 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 UNC5DQ6UXZ4 953 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 SYVN1Q86TM6 617 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 ZBTB2Q8N680 514 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 ZNF655Q8N720 491 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 OR2L8Q8NGY9 312 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 TCTN2Q96GX1 697 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 GBP5Q96PP8 586 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 GPR87Q9BY21 358 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 FANCEQ9HB96 536 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 PLAC1Q9HBJ0 212 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 FBXO6Q9NRD1 293 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 HOMER3Q9NSC5 361 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 TCFL5Q9UL49 500 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 MAN2B2Q9Y2E5 1009 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 DOCK10Q96BY6 2186 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 MYO18BQ8IUG5 2567 aa16.1■□□□□ 0.17
PDLIM7-201ENST00000355572 KIF5CO60282 957 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 WISP1O95388 367 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 RECKO95980 971 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 OGNP20774 298 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 MPP1Q00013 466 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 CTBP1Q13363 440 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 RNASEH2BQ5TBB1 312 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 CILP2Q8IUL8 1156 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 MCUQ8NE86 351 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 ACTRT1Q8TDG2 376 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 PANX3Q96QZ0 392 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 NLNQ9BYT8 704 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 DDX47Q9H0S4 455 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 SYTL2Q9HCH5 934 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 SERTAD3Q9UJW9 196 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 SNX12Q9UMY4 172 aa16.09■□□□□ 0.17
PDLIM7-201ENST00000355572 FAM237BA0A1B0GVD1 139 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 ARHGEF33A8MVX0 844 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 CTSVO60911 334 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 KLF7O75840 302 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 OR2B3O76000 313 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 MATN4O95460 622 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 KLK3P07288 261 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 RAB40ALP0C0E4 278 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 PPARGP37231 505 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 SLC1A2P43004 574 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 CLCN7P51798 805 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 RPS15P62841 145 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 TIAL1Q01085 375 aaKnown RBP eCLIP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 CUL1Q13616 776 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 DHX34Q14147 1143 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 NCF4Q15080 339 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 IGFBP7Q16270 282 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 MSS51Q4VC12 460 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 LACTB2Q53H82 288 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 NEPROQ6NW34 567 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 CASC4Q6P4E1 433 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 ATG14Q6ZNE5 492 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 OTOAQ7RTW8 1153 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 LRRC6Q86X45 466 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 IGDCC3Q8IVU1 814 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 APLFQ8IW19 511 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 PWWP2AQ96N64 755 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 WDR83Q9BRX9 315 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 TSSK1BQ9BXA7 367 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 CHRNA10Q9GZZ6 450 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 EURLQ9NYK6 297 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 SLC17A6Q9P2U8 582 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
PDLIM7-201ENST00000355572 SPTA1P02549 2419 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 CYSRT1A8MQ03 144 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 AP3B1O00203 1094 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 RFPL1O75677 317 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 MLNP12872 115 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 PKMP14618 531 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 IVDP26440 423 aa16.07■□□□□ 0.16
PDLIM7-201ENST00000355572 PGGT1BP53609 377 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms