RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SLCO4A1Q96BD0 722 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 ASB9Q96DX5 294 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 TTYH2Q9BSA4 534 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 MVB12BQ9H7P6 319 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 CAB39LQ9H9S4 337 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 NPAP1Q9NZP6 1156 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 LOC100653049A0A140TA62 436 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 GABRDO14764 452 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 INPPL1O15357 1258 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 KRT34O76011 436 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 NCF2P19878 526 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 KELP23276 732 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 FMO4P31512 558 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 CCL23P55773 120 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 GALEQ14376 348 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 ARL13AQ5H913 290 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 SEL1L3Q68CR1 1132 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 CES3Q6UWW8 571 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 FAM131BQ86XD5 332 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 CCDC103Q8IW40 242 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 RAB2BQ8WUD1 216 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 MFSD3Q96ES6 412 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 ZNF419Q96HQ0 510 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 DMRTB1Q96MA1 342 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 RIPOR3Q96MK2 946 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 RBM4BQ9BQ04 359 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 RBM4Q9BWF3 364 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 DUSP16Q9BY84 665 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 RHOJQ9H4E5 214 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 RGS18Q9NS28 235 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 MID2Q9UJV3 735 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 DTX4Q9Y2E6 619 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 TCRBV3S1A0A5B6 114 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 E2F8A0AVK6 867 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 ISPDA4D126 451 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 LDLRAD4O15165 306 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 TBX18O95935 607 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 SPNP16150 400 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 PTPN1P18031 435 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 RABIFP47224 123 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 GRIA4P48058 902 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 FPGSQ05932 587 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 MRPL58Q14197 206 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 DESI1Q6ICB0 168 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 ZNF544Q6NX49 715 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 SLC27A1Q6PCB7 646 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 KCTD8Q6ZWB6 473 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 KCNMB4Q86W47 210 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 FNDC5Q8NAU1 212 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 ZNF680Q8NEM1 530 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 MOSPD2Q8NHP6 518 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 METTL6Q8TCB7 284 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 OSMRQ99650 979 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 WDR55Q9H6Y2 383 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 EVA1AQ9H8M9 152 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 LRRC4Q9HBW1 653 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 IFT46Q9NQC8 304 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 NSMCE4AQ9NXX6 385 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 COPG1Q9Y678 874 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 F8W036 122 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 BMP4P12644 408 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 NUDT2P50583 147 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 ZNF267Q14586 743 aaPredicted RBP10.59□□□□□ -0.71
SND1-201ENST00000354725 LTB4RQ15722 352 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 CASC4Q6P4E1 433 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 CNKSR3Q6P9H4 555 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
SND1-201ENST00000354725 OR13F1Q8NGS4 319 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 PPP1R2P1Q96PQ5 205 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 CSF3RQ99062 836 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 VAT1Q99536 393 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 FAM49AQ9H0Q0 323 aaPredicted RBP10.59□□□□□ -0.71
SND1-201ENST00000354725 COQ10BQ9H8M1 238 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 PADI3Q9ULW8 664 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 PDZK1P1A8MUH7 402 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 SDHDO14521 159 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 ZBTB24O43167 697 aaPredicted RBP10.59□□□□□ -0.71
SND1-201ENST00000354725 TXNL1O43396 289 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 BEST1O76090 585 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 SCAF4O95104 1147 aaKnown RBP10.59□□□□□ -0.71
SND1-201ENST00000354725 TRIM16O95361 564 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 ETV5P41161 510 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 CCR10P46092 362 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 HABP2Q14520 560 aaPredicted RBP10.59□□□□□ -0.71
SND1-201ENST00000354725 NCF4Q15080 339 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 C9orf50Q5SZB4 431 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 SYPL2Q5VXT5 272 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 DENND5AQ6IQ26 1287 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 HMBOX1Q6NT76 420 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 HACD2Q6Y1H2 254 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 CYHR1Q6ZMK1 362 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 PRSS42Q7Z5A4 293 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 ZSWIM9Q86XI8 627 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 WDR48Q8TAF3 677 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 RNF34Q969K3 372 aa10.59□□□□□ -0.71
SND1-201ENST00000354725 ZNF669Q96BR6 464 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms