RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RPS21P63220 83 aaKnown RBP14.57□□□□□ -0.08
COL17A1-201ENST00000353479 WDR45BQ5MNZ6 344 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 SMYD5Q6GMV2 418 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 PM20D1Q6GTS8 502 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 GKN2Q86XP6 184 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 CACTIN-AS1Q8N1I8 211 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 C19orf18Q8NEA5 215 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 KIAA1191Q96A73 305 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 LRIG1Q96JA1 1093 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 PRRG4Q9BZD6 226 aa14.57□□□□□ -0.08
COL17A1-201ENST00000353479 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 KLK1P06870 262 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 ZNF24P17028 368 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 NAIF1Q69YI7 327 aaPredicted RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 SUSD1Q6UWL2 747 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 SAMD14Q8IZD0 417 aaPredicted RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 COX18Q8N8Q8 333 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 HM13Q8TCT9 377 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 KCNJ9Q92806 393 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TOP1MTQ969P6 601 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 CACNA1SQ13698 1873 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 SCN7AQ01118 1682 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TMEM150CB9EJG8 249 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 ELAVL3Q14576 367 aaKnown RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 PHF19Q5T6S3 580 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TOX2Q96NM4 488 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 NECTIN4Q96NY8 510 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 SLC2A11Q9BYW1 496 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 ADAP2Q9NPF8 381 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 ERGIC3Q9Y282 383 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 DGKBQ9Y6T7 804 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TNFRSF11BO00300 401 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 SCELO95171 688 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 HOXB6P17509 224 aaKnown RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TCEA1P23193 301 aaKnown RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 Q8N9G6 341 aaPredicted RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 ZNF282Q9UDV7 671 aaPredicted RBP14.56□□□□□ -0.08
COL17A1-201ENST00000353479 WFS1O76024 890 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 IL12BP29460 328 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 TRAF3Q13114 568 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 HEATR4Q86WZ0 1026 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 C10orf82Q8WW14 230 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 CMTM7Q96FZ5 175 aa14.56□□□□□ -0.08
COL17A1-201ENST00000353479 MYCLP1P12525 358 aaPredicted RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PCSK2P16519 638 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 BTN3A2P78410 334 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 TGFBIQ15582 683 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 DPY19L1Q2PZI1 675 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 GPR151Q8TDV0 419 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 RAB7BQ96AH8 199 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 JSRP1Q96MG2 331 aaPredicted RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 MKL2Q9ULH7 1088 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 AP2A2O94973 939 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 SRPRAP08240 638 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 TYRP1P17643 537 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 CD247P20963 164 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 CTSKP43235 329 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 AAK1Q2M2I8 961 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 UAP1L1Q3KQV9 507 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 DCUN1D3Q8IWE4 304 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 CEP295NLQ96MC4 621 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 S100A13Q99584 98 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 LINC00597Q9H2U6 94 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 CXCR6O00574 342 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 DNAJA2O60884 412 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 UBXN7O94888 489 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 SLC18A2Q05940 514 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 RAPSNQ13702 412 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 SUZ12Q15022 739 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 EIF4HQ15056 248 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 ALKBH2Q6NS38 261 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 SLC9B2Q86UD5 537 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 SFRP1Q8N474 314 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 CAMKVQ8NCB2 501 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PIK3C3Q8NEB9 887 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 ZNF671Q8TAW3 534 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 GLYATL1Q969I3 302 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 OR52B2Q96RD2 323 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 CALML5Q9NZT1 146 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 GSTK1Q9Y2Q3 226 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PIAS3Q9Y6X2 628 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 hCG_2039718K7EN88 272 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PRPS1L1P21108 318 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 MPIP34949 423 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 NIPAL4Q0D2K0 466 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 RTL4Q6ZR62 310 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PIGWQ7Z7B1 504 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 TXNDC5Q8NBS9 432 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 OR9A1PQ8NGU1 263 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PNO1Q9NRX1 252 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 TMEM189-UBE2V1I3L0A0 370 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 TSPAN6O43657 245 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 RNGTTO60942 597 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 OAS1P00973 400 aaKnown RBP14.55□□□□□ -0.08
COL17A1-201ENST00000353479 KHKP50053 298 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 LGALS3BPQ08380 585 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PON2Q15165 354 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 TIMM50Q3ZCQ8 353 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms