RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 XKR7Q5GH72 579 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ANKS6Q68DC2 871 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 GLYATQ6IB77 296 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF773Q6PK81 442 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SLC2A7Q6PXP3 512 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CRTC1Q6UUV9 634 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 RALGPS2Q86X27 583 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 RIMKLAQ8IXN7 391 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 PNPT1Q8TCS8 783 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 PROKR1Q8TCW9 393 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SGCDQ92629 289 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 FBXL8Q96CD0 374 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CNDP2Q96KP4 475 aaKnown RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 BDH2Q9BUT1 245 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 BRINP2Q9C0B6 783 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 FANCEQ9HB96 536 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 CATSPERZQ9NTU4 200 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 ELOVL2Q9NXB9 296 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 TMEM9Q9P0T7 183 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SLC25A13Q9UJS0 675 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 LEF1Q9UJU2 399 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-204ENST00000353317 SLC27A6Q9Y2P4 619 aa8.41□□□□□ -1.06
TRIM55-204ENST00000353317 UBA6A0AVT1 1052 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 FUOMA2VDF0 154 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 K7EPI3 171 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 PLK4O00444 970 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 RSL1D1O76021 490 aaKnown RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 SEC14L2O76054 403 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 ADH1CP00326 375 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 ENO2P09104 434 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 PCNAP12004 261 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF12P17014 697 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 HMGCLP35914 325 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 MLLT10P55197 1068 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 EMX2Q04743 252 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 RUNX3Q13761 415 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 SLC44A4Q53GD3 710 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 C16orf87Q6PH81 154 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 CENPSQ8N2Z9 138 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 SLC15A4Q8N697 577 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 ZBTB8BQ8NAP8 495 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 BPIFB6Q8NFQ5 453 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 NUDT8Q8WV74 236 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 SNX19Q92543 992 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 CSF3RQ99062 836 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 DERL2Q9GZP9 239 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 ATP13A3Q9H7F0 1226 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 MAGEE1Q9HCI5 957 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 LTB4R2Q9NPC1 389 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 MBD1Q9UIS9 605 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-204ENST00000353317 ASB1Q9Y576 335 aa8.4□□□□□ -1.06
TRIM55-204ENST00000353317 C1orf232A0A0U1RR37 186 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 RHOBTB1O94844 696 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 POP4O95707 220 aaKnown RBP8.4□□□□□ -1.07
TRIM55-204ENST00000353317 ESRRBO95718 433 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 FUCA1P04066 466 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 ALPLP05186 524 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 OCM2P0CE71 109 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 OCMP0CE72 109 aaPredicted RBP8.4□□□□□ -1.07
TRIM55-204ENST00000353317 UROSP10746 265 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 BPIP17213 487 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 HOXB8P17481 243 aaPredicted RBP8.4□□□□□ -1.07
TRIM55-204ENST00000353317 IGFBP4P22692 258 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 GDI1P31150 447 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 FMO4P31512 558 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 MC4RP32245 332 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 MAGEA8P43361 318 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 ALDH3A2P51648 485 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 TMBIM6P55061 237 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 MTPNP58546 118 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.07
TRIM55-204ENST00000353317 SELPLGQ14242 412 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 COL19A1Q14993 1142 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 CRY1Q16526 586 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 TYSND1Q2T9J0 566 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 HABP4Q5JVS0 413 aaKnown RBP8.4□□□□□ -1.07
TRIM55-204ENST00000353317 PROSER1Q86XN7 944 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 HID1Q8IV36 788 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 DTWD1Q8N5C7 304 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 SMRP1Q8NCR6 262 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 GPR26Q8NDV2 337 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 TMBIM1Q969X1 311 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 NSMCE2Q96MF7 247 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 CPEB1Q9BZB8 566 aaKnown RBP8.4□□□□□ -1.07
TRIM55-204ENST00000353317 CEP44Q9C0F1 390 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 LHPPQ9H008 270 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 ABCG8Q9H221 673 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 IL26Q9NPH9 171 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 PCTPQ9UKL6 214 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 RIMKLBQ9ULI2 386 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 COQ6Q9Y2Z9 468 aa8.4□□□□□ -1.07
TRIM55-204ENST00000353317 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 NPEPPSL1A6NEC2 478 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 C2orf81A6NN90 581 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SYNCRIPO60506 623 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SNX2O60749 519 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 NOL3O60936 208 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SOCS5O75159 536 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms