RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 PCDHA9Q9Y5H5 950 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 ST14Q9Y5Y6 855 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 V9GYQ6 96 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 ZNF106Q9H2Y7 1883 aaKnown RBP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 PSMD11O00231 422 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 SLC22A1O15245 554 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 RAD51BO15315 384 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 SOCS5O75159 536 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 VPS4BO75351 444 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 GGT5P36269 586 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 TPTEP56180 551 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 PCBP2Q15366 365 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■■■■□ 21.4
COPS7B-201ENST00000350033 ZNF648Q5T619 568 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 ZNF697Q5TEC3 545 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 MINDY1Q8N5J2 469 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 OR2T34Q8NGX1 318 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 OR2T3Q8NH03 318 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 CAPSLQ8WWF8 208 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 TMEM125Q96AQ2 219 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 PDLIM5Q96HC4 596 aaKnown RBP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 FAM126AQ9BYI3 521 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 ACTL8Q9H568 366 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 SUV39H2Q9H5I1 410 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 WWOXQ9NZC7 414 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-201ENST00000350033 TMPRSS11EQ9UL52 423 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 CROCCQ5TZA2 2017 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 SZT2Q5T011 3432 aa13.12□□□□□ -0.31
COPS7B-201ENST00000350033 AKAP10O43572 662 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 MT-ND1P03886 318 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 C1SP09871 688 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SLC7A1P30825 629 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SNRPD1P62314 119 aaKnown RBP13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SELPLGQ14242 412 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 HOPXQ9BPY8 73 aaPredicted RBP13.11□□□□□ -0.31
COPS7B-201ENST00000350033 BBS2Q9BXC9 721 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 BRINP2Q9C0B6 783 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 HOXD1Q9GZZ0 328 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SAGE1Q9NXZ1 904 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 OARD1Q9Y530 152 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SAC3D1A6NKF1 404 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 ARPC2O15144 300 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 IDH3BO43837 385 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 DGKAP23743 735 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 CCR7P32248 378 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 PPM1AP35813 382 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 RGS4P49798 205 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 GSK3BP49841 420 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 CDH15P55291 814 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 ARHGEF7Q14155 803 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 PPP4R4Q6NUP7 873 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 ZNF366Q8N895 744 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
COPS7B-201ENST00000350033 RHBDF1Q96CC6 855 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SCRN2Q96FV2 425 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 ZNF486Q96H40 463 aaPredicted RBP13.11□□□□□ -0.31
COPS7B-201ENST00000350033 ZFP14Q9HCL3 533 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 B4GALT6Q9UBX8 382 aa13.11□□□□□ -0.31
COPS7B-201ENST00000350033 SPTBN5Q9NRC6 3674 aaKnown RBP13.1□□□□□ -0.31
COPS7B-201ENST00000350033 HELZP42694 1942 aaKnown RBP13.1□□□□□ -0.31
COPS7B-201ENST00000350033 M0QX08 132 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 SOCS2O14508 198 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 ICMTO60725 284 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 MOSPD3O75425 235 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 CXCR2P25025 360 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 RFC2P35250 354 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 CSNK1DP48730 415 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 RPL38P63173 70 aaKnown RBP13.1□□□□□ -0.31
COPS7B-201ENST00000350033 LIPEQ05469 1076 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
COPS7B-201ENST00000350033 PTGR1Q14914 329 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 ZXDCQ2QGD7 858 aaPredicted RBP13.1□□□□□ -0.31
COPS7B-201ENST00000350033 MPP7Q5T2T1 576 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 GALNT18Q6P9A2 607 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 TMEM199Q8N511 208 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 ING5Q8WYH8 240 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 PPM1MQ96MI6 270 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 ZSWIM3Q96MP5 696 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 KLQ9UEF7 1012 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 ANGPTL3Q9Y5C1 460 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 A8MU76 341 aa13.1□□□□□ -0.31
COPS7B-201ENST00000350033 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms