RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PMS2P3Q13401 168 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 USP39Q53GS9 565 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 ZNF697Q5TEC3 545 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 NAT16Q8N8M0 369 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 IGSF21Q96ID5 467 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 QRFPRQ96P65 431 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 CRISPLD1Q9H336 500 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 CDC14AQ9UNH5 594 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 XIRP1Q702N8 1843 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 TBX1O43435 398 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 FAM131AQ6UXB0 335 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ZNF438Q7Z4V0 828 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 MRPL10Q7Z7H8 261 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 RBM12BQ8IXT5 1001 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 AP3S1Q92572 193 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ACDQ96AP0 544 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ZNF641Q96N77 438 aaPredicted RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 MOV10Q9HCE1 1003 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 CREG1O75629 220 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 CDK4P11802 303 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 SH3BP2P78314 561 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 CAP1Q01518 475 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 PKDCCQ504Y2 493 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 RAET1GQ6H3X3 334 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 OR2T5Q6IEZ7 315 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 SYVN1Q86TM6 617 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ALDH16A1Q8IZ83 802 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 SMG8Q8ND04 991 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 OR2T29Q8NH02 315 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ASZ1Q8WWH4 475 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 PYURFQ96I23 114 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 BBS4Q96RK4 519 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 CYP2S1Q96SQ9 504 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 EXD2Q9NVH0 621 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ATP6V1HQ9UI12 483 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 LRRC14BA6NHZ5 514 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 GALTP07902 379 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 PAICSP22234 425 aaKnown RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 PRKACGP22612 351 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 CXCR2P25025 360 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 ZFP69Q49AA0 526 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 GPR153Q6NV75 609 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 OR8J3Q8NGG0 315 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 PGAP3Q96FM1 320 aaPredicted RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 ATG10Q9H0Y0 220 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 MARCH4Q9P2E8 410 aaPredicted RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 FGF18O76093 207 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ANXA4P09525 319 aaPredicted RBP14.42□□□□□ -0.1
NUP50-201ENST00000347635 CHIT1Q13231 466 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 LRP8Q14114 963 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 TIGD6Q17RP2 521 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 DPY19L1Q2PZI1 675 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 DEF8Q6ZN54 512 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 DZANK1Q9NVP4 752 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 MAGEB3O15480 346 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 MPZL2O60487 215 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ELFN1P0C7U0 828 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 GRIA2P42262 883 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 CDH12P55289 794 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 SERINC3Q13530 473 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ADGRF1Q5T601 910 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 SNX20Q7Z614 316 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 RAB43Q86YS6 212 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 KRT78Q8N1N4 520 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 PIK3R3Q92569 461 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 NACC2Q96BF6 587 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 LRCH3Q96II8 777 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ZNF382Q96SR6 550 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 AASDHPPTQ9NRN7 309 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 FAIMQ9NVQ4 179 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 FBXO10Q9UK96 956 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 RAB23Q9ULC3 237 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 BOLA2-SMG1P6H3BVE0 249 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 PRAMEF11O60813 436 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 PGRP06401 933 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 COLEC12Q5KU26 742 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 AGMOQ6ZNB7 445 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 CAMKK1Q8N5S9 505 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 PEX13Q92968 403 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ITPAQ9BY32 194 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ERVW-1Q9UQF0 538 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 PIPSLA2A3N6 862 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
NUP50-201ENST00000347635 TFAP2AP05549 437 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 CTSEP14091 401 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 TEAD4Q15561 434 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 ATAD3BQ5T9A4 648 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 CLEC14AQ86T13 490 aa14.42□□□□□ -0.1
NUP50-201ENST00000347635 TEFMQ96QE5 360 aaKnown RBP14.42□□□□□ -0.1
NUP50-201ENST00000347635 TCRBV3S1A0A5B6 114 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 ZBTB42B2RXF5 422 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 CCNDBP1O95273 360 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 C8GP07360 202 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 PTX3P26022 381 aaPredicted RBP14.41□□□□□ -0.1
NUP50-201ENST00000347635 GRIK2Q13002 908 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 OR4D1Q15615 310 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 PM20D1Q6GTS8 502 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 CDC73Q6P1J9 531 aa14.41□□□□□ -0.1
NUP50-201ENST00000347635 ISCA2Q86U28 154 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms