RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PRSS16Q9NQE7 514 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 RAD18Q9NS91 495 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 THAP10Q9P2Z0 257 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-202ENST00000345734 PDE10AQ9Y233 779 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 TMEM98Q9Y2Y6 226 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 NUMA1Q14980 2115 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CKAP5Q14008 2032 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 AREL1O15033 823 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 NUAK1O60285 661 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 TBX10O75333 385 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 RECQL5O94762 991 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 B3GALT4O96024 378 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 SOD1P00441 154 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CAPN1P07384 714 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 LAMP2P13473 410 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 C6P13671 934 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ENO3P13929 434 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 HGFP14210 728 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 GPX3P22352 226 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 DPP6P42658 865 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 HTR6P50406 440 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 PKNOX1P55347 436 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ZXDCQ2QGD7 858 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 C1orf146Q5VVC0 180 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 SULT1C3Q6IMI6 304 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 HPS6Q86YV9 775 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 FUNDC1Q8IVP5 155 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 NRSN1Q8IZ57 195 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ENDOVQ8N8Q3 282 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ATP6V1E2Q96A05 226 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ELSPBP1Q96BH3 223 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CCDC124Q96CT7 223 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 HBEGFQ99075 208 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 NUSAP1Q9BXS6 441 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CD244Q9BZW8 370 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 RDH14Q9HBH5 336 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CNOT6Q9ULM6 557 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ST14Q9Y5Y6 855 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 C9JVG2 144 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 H0Y858 1186 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 PSMD11O00231 422 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 FBP2O00757 339 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CFLARO15519 480 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 TSPAN6O43657 245 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 AP2A2O94973 939 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 PSMG1O95456 288 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 LBPP18428 481 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ADH6P28332 368 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ATP4BP51164 291 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CCNG1P51959 295 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 DIO3P55073 304 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ACTR3P61158 418 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 TMEM115Q12893 351 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 TRAF3Q13114 568 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ART3Q13508 389 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 BLMHQ13867 455 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 RCN1Q15293 331 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 KIF19Q2TAC6 998 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 TRMT5Q32P41 509 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 XKR7Q5GH72 579 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 LDLRAP1Q5SW96 308 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 PLEKHS1Q5SXH7 462 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CES5AQ6NT32 575 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ERN2Q76MJ5 926 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 RAVER1Q8IY67 606 aaKnown RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 FBXW8Q8N3Y1 598 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 LILRA3Q8N6C8 439 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-202ENST00000345734 SMYD1Q8NB12 490 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 CFAP61Q8NHU2 1237 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 METTL6Q8TCB7 284 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 UBTD2Q8WUN7 234 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 UCMAQ8WVF2 138 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ASB11Q8WXH4 323 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 VPS35Q96QK1 796 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 SLC12A9Q9BXP2 914 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 EFCAB1Q9HAE3 211 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 ARL15Q9NXU5 204 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 OPTCQ9UBM4 332 aa9.01□□□□□ -0.97
ATG4A-202ENST00000345734 K7EPI3 171 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 EIF3FO00303 357 aaPredicted RBP9□□□□□ -0.97
ATG4A-202ENST00000345734 ARNTLO00327 626 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 CHEK2O96017 543 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 PRR35P0CG20 571 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 MPC1LP0DKB6 136 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 P2RY2P41231 377 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 GRIA2P42262 883 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 PIK3CGP48736 1102 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 STX1BP61266 288 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 ELP6Q0PNE2 266 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 CNTN1Q12860 1018 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 ITPRIPL2Q3MIP1 535 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 REP15Q6BDI9 236 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 TMEM220Q6QAJ8 160 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 C16orf89Q6UX73 402 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 MILR1Q7Z6M3 343 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 IQCF2Q8IXL9 164 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 FAM169BQ8N8A8 192 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 PPP1R14BQ96C90 147 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 NUS1Q96E22 293 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms