RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MGAT1P26572 445 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 NMBRP28336 390 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 ACVR1Q04771 509 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 NCF4Q15080 339 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 VWA5B1Q5TIE3 1220 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 FAM69BQ5VUD6 431 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 CPZQ66K79 652 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 JMJD6Q6NYC1 403 aaPredicted RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 CASC4Q6P4E1 433 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 DRICH1Q6PGQ1 229 aaPredicted RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 SDCCAG8Q86SQ7 713 aaPredicted RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 SLC22A15Q8IZD6 547 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 LMNTD1Q8N9Z9 388 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 PEX13Q92968 403 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 VPS50Q96JG6 964 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 AP1M1Q9BXS5 423 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 IL22Q9GZX6 179 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 SPRTNQ9H040 489 aaPredicted RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 EIF2B3Q9NR50 452 aaKnown RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 TXLNGQ9NUQ3 528 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 PLEKHB1Q9UF11 243 aaPredicted RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
SGCA-202ENST00000344627 SLC39A10Q9ULF5 831 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 SRPK3Q9UPE1 567 aa11.97□□□□□ -0.49
SGCA-202ENST00000344627 FLNCQ14315 2725 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 PCM1Q15154 2024 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 RP1L1Q8IWN7 2480 aaPredicted RBP11.96□□□□□ -0.49
SGCA-202ENST00000344627 A6NL46 340 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 GOLGA8KD6RF30 607 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 GOLGA8TH3BQL2 631 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 PEX12O00623 359 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 PFDN6O15212 129 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 ZNF185O15231 689 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 VAPBO95292 243 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 GNLYP22749 145 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 AOAHP28039 575 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 OTX2P32243 289 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 PTGIRP43119 386 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 RAB28P51157 221 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 EIF3BP55884 814 aaKnown RBP11.96□□□□□ -0.49
SGCA-202ENST00000344627 SOX8P57073 446 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 SARNPP82979 210 aaKnown RBP11.96□□□□□ -0.49
SGCA-202ENST00000344627 KIR2DS3Q14952 304 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 INPP5JQ15735 1006 aaPredicted RBP11.96□□□□□ -0.49
SGCA-202ENST00000344627 ZIC1Q15915 447 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 ZNF789Q5FWF6 425 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 MRNIPQ6NTE8 343 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 TLDC1Q6P9B6 456 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 IGFL3Q6UXB1 125 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 ZNF662Q6ZS27 426 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 OTOAQ7RTW8 1153 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 IQCKQ8N0W5 287 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 ZNF655Q8N720 491 aaPredicted RBP11.96□□□□□ -0.49
SGCA-202ENST00000344627 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 FDCSPQ8NFU4 85 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 FOPNLQ96NB1 174 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 IL17FQ96PD4 163 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 PANX3Q96QZ0 392 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 SYBUQ9NX95 663 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 KLHL20Q9Y2M5 609 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 PPP2R2CQ9Y2T4 447 aa11.96□□□□□ -0.49
SGCA-202ENST00000344627 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.5
SGCA-202ENST00000344627 LRRK2Q5S007 2527 aa11.96□□□□□ -0.5
SGCA-202ENST00000344627 ANKRD12Q6UB98 2062 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 TCRBV7S3A2A0A539 114 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 KPNA5O15131 536 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 GPC4O75487 556 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 CAPN1P07384 714 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 TPBGLP0DKB5 382 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 CBSLP0DN79 551 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 PIM1P11309 404 aaPredicted RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 ALAS2P22557 587 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 PKLRP30613 574 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 FMO4P31512 558 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 CBSP35520 551 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 CDK16Q00536 496 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 GPS1Q13098 491 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 SLC9A5Q14940 896 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 SF1Q15637 639 aaKnown RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 KYNUQ16719 465 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 SLC5A12Q1EHB4 618 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 NADK2Q4G0N4 442 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 RHBDD2Q6NTF9 364 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 LRRC8BQ6P9F7 803 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 FAM198BQ6UWH4 519 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 UNC5DQ6UXZ4 953 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 DCUN1D3Q8IWE4 304 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 RAB42Q8N4Z0 105 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 ZBTB2Q8N680 514 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 MAGOHBQ96A72 148 aaKnown RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 SLC22A18Q96BI1 424 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 FAM136AQ96C01 138 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 MFSD3Q96ES6 412 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 NDC1Q9BTX1 674 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 INTS7Q9NVH2 962 aaKnown RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 IFT80Q9P2H3 777 aaPredicted RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 DHCR7Q9UBM7 475 aaKnown RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 NDOR1Q9UHB4 597 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 PLCL2Q9UPR0 1127 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms