RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 APIPQ96GX9 242 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 MUS81Q96NY9 551 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SLC29A3Q9BZD2 475 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SMURF2Q9HAU4 748 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CD320Q9NPF0 282 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 GNGT2O14610 69 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 NOBOXO60393 691 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 RFPL2O75678 378 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CST1P01037 141 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CTSAP10619 480 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 S100A3P33764 101 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CDKN2CP42773 168 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ESRRGP62508 458 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 TEAD2Q15562 447 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 GDPD4Q6W3E5 623 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 FAM43BQ6ZT52 329 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 Q6ZVL8 140 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 HSD11B1LQ7Z5J1 315 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ASB11Q8WXH4 323 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 TOX2Q96NM4 488 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SLC12A9Q9BXP2 914 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PKD2L2Q9NZM6 624 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 EBF1Q9UH73 591 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ZNF639Q9UID6 485 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PRAMEF4O60810 478 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SH3BGRLO75368 114 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 C7P10643 843 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PPM1AP35813 382 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ETV3P41162 512 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CDK9P50750 372 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 DDX39BQ13838 428 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 RUNDC3AQ59EK9 446 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PRAMEF9Q5VWM5 478 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ZNF366Q8N895 744 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ST13P5Q8NFI4 369 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 C8orf4Q9NR00 106 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 GPRC5BQ9NZH0 403 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PPT2Q9UMR5 302 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CDC14AQ9UNH5 594 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SNX6Q9UNH7 406 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SPTBN5Q9NRC6 3674 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 TMEM202A6NGA9 273 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 ZBBXA8MT70 800 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 H0Y858 1186 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 C1QCP02747 245 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 CLTBP09497 229 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 TYRP14679 529 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 SDC1P18827 310 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 EEF1B2P24534 225 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 RECQLP46063 649 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 ALDH3A2P51648 485 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 DAG1Q14118 895 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 SF1Q15637 639 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 NEDD8Q15843 81 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 CCDC149Q6ZUS6 474 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 LRRC70Q7Z2Q7 622 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 NECAB2Q7Z6G3 386 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 ZDHHC13Q8IUH4 622 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 CHCHD4Q8N4Q1 142 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 KLHL23Q8NBE8 558 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 OR2A12Q8NGT7 310 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 FAM120BQ96EK7 910 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 CCDC115Q96NT0 180 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 C19orf43Q9BQ61 176 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 UGT2B28Q9BY64 529 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 PAIP1Q9H074 479 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 POLR1BQ9H9Y6 1135 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 ZNF106Q9H2Y7 1883 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 IGLV3-16A0A075B6K0 115 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 G3V2T6 193 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 C8GP07360 202 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 SHMT2P34897 504 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 PTPN5P54829 565 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 ADARB1P78563 741 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 ABRQ12979 859 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 MICU2Q8IYU8 434 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 SDCCAG3Q96C92 435 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 DCUN1D5Q9BTE7 237 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 GORASP2Q9H8Y8 452 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 PPIL1Q9Y3C6 166 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 U3KQV3 271 aa14.5□□□□□ -0.09
VIPAS39-202ENST00000343765 KCNE1BA0A087WTH5 132 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 TTC34A8MYJ7 566 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 LEFTY1O75610 366 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 SERPINA1P01009 418 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 ALPLP05186 524 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 ADH1AP07327 375 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 THRBP10828 461 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 CHIT1Q13231 466 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 PMS2P3Q13401 168 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 ARSIQ5FYB1 569 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 PLPP4Q5VZY2 271 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 TMEM215Q68D42 235 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 LILRA6Q6PI73 481 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 SPESP1Q6UW49 350 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 CYP2U1Q7Z449 544 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 NETO1Q8TDF5 533 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 ZNF641Q96N77 438 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 NPLQ9BXD5 320 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 EMILIN2Q9BXX0 1053 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms