RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 RPL38P63173 70 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 PRR5P85299 388 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 REP15Q6BDI9 236 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 C16orf86Q6ZW13 317 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 DCP2Q8IU60 420 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SUMF2Q8NBJ7 301 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NKX2-3Q8TAU0 364 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 STON2Q8WXE9 905 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF341Q9BYN7 854 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF70Q9UC06 446 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 HACL1Q9UJ83 578 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 OAZ3Q9UMX2 235 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 MAGI2Q86UL8 1455 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PROSCO94903 275 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CPB1P15086 417 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RAB3AP20336 220 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 MSX2P35548 267 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SLC26A2P50443 739 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SULT2A1Q06520 285 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NIPAL4Q0D2K0 466 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 QPCTQ16769 361 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NDUFA9Q16795 377 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CARD16Q5EG05 197 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NOTUMQ6P988 496 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZNF410Q86VK4 478 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 LRTOMTQ8WZ04 291 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ATG5Q9H1Y0 275 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NUFIP1Q9UHK0 495 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SLC27A6Q9Y2P4 619 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PCDHB5Q9Y5E4 795 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PCDHA10Q9Y5I2 948 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ANKUB1A6NFN9 424 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 H3BSA7 217 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 GH1P01241 217 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 CAMLGP49069 296 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ACOT2P49753 483 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CDK3Q00526 305 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PPP3CAQ08209 521 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 FGFBP1Q14512 234 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 FAM160A2Q8N612 972 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SAMD12Q8N8I0 201 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SMPDL3AQ92484 453 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NCSTNQ92542 709 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 DPCDQ9BVM2 203 aaPredicted RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 CEP41Q9BYV8 373 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ATP13A3Q9H7F0 1226 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ARL8BQ9NVJ2 186 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 POMPQ9Y244 141 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 RIMS1Q86UR5 1692 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 FADS1O60427 444 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TBX10O75333 385 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SCELO95171 688 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PTBP3O95758 552 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 SERPINA4P29622 427 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PKLRP30613 574 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 EIF2DP41214 584 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 MAP3K8P41279 467 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SPIN3Q5JUX0 258 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 UBE2UQ5VVX9 321 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 TRABD2AQ86V40 505 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SCML4Q8N228 414 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 C1orf216Q8TAB5 229 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 SLC38A4Q969I6 547 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 PTCHD1Q96NR3 888 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 COQ10BQ9H8M1 238 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 WASH6PQ9NQA3 447 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 ZFP57Q9NU63 452 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 MAT2BQ9NZL9 334 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 KLQ9UEF7 1012 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 FBXL3Q9UKT7 428 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 CNOT6Q9ULM6 557 aaKnown RBP6.06□□□□□ -1.44
VCAN-203ENST00000343200 WASF2Q9Y6W5 498 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 NCANO14594 1321 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 A0A0A0MRY4 1105 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 AZIN1O14977 448 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PPP1R2P9O14990 202 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 EGFRP00533 1210 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PCCAP05165 728 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 ALPPP05187 535 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CD9P21926 228 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ENTPD1P49961 510 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 RHDQ02161 417 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PIGGQ5H8A4 983 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PET117Q6UWS5 81 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ECHDC2Q86YB7 292 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MMAAQ8IVH4 418 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 UNC5BQ8IZJ1 945 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 OSTF1Q92882 214 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SPATA13Q96N96 652 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C2orf49Q9BVC5 232 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 GON7Q9BXV9 100 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 LRRC3Q9BY71 257 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 GJB4Q9NTQ9 266 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SBF2Q86WG5 1849 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TAF1LQ8IZX4 1826 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 H3BRB1 525 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MFSD11O43934 449 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms