RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 FAM149AA5PLN7 773 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 SYNDIG1LA6NDD5 238 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 TMEM8BA6NDV4 472 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 PLOD3O60568 738 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 JUPP14923 745 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 MSH3P20585 1137 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 AKT1P31749 480 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 GALNSP34059 522 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 KRT20P35900 424 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 MAGEA3P43357 314 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 PRLHRP49683 370 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 VPS41P49754 854 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 UBE2IP63279 158 aaKnown RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 TARDBPQ13148 414 aaKnown RBP eCLIP10.04□□□□□ -0.8
TPM3-207ENST00000341372 PTK6Q13882 451 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 ITIH4Q14624 930 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 CLPPQ16740 277 aaPredicted RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 ANKRD22Q5VYY1 191 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 MRPL14Q6P1L8 145 aaKnown RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 FBXO38Q6PIJ6 1188 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 AFTPHQ6ULP2 937 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 ABRAXAS1Q6UWZ7 409 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 MICALCLQ6ZW33 695 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 SERPINA9Q86WD7 417 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 AVL9Q8NBF6 648 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 KCT2Q8NC54 265 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 TMEM41AQ96HV5 264 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 TTC25Q96NG3 672 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 COPS8Q99627 209 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 KIFC1Q9BW19 673 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 QRSL1Q9H0R6 528 aaKnown RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 DDX47Q9H0S4 455 aaKnown RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 LRRN3Q9H3W5 708 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 DKK4Q9UBT3 224 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 SLC2A6Q9UGQ3 507 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 GDF2Q9UK05 429 aaPredicted RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 ACACAQ13085 2346 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 CCDC162PA2VCL2 907 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 D6RAR5 112 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 CCDC188H7C350 402 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 CASC3O15234 703 aaKnown RBP10.03□□□□□ -0.8
TPM3-207ENST00000341372 PPM1DO15297 605 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 PRSS56P0CW18 603 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 RALBP11234 206 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 VCLP18206 1134 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 CCL7P80098 99 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 PMS2P11Q13670 270 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 SPIDRQ14159 915 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 DBN1Q16643 649 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 KCTD19Q17RG1 926 aaPredicted RBP10.03□□□□□ -0.8
TPM3-207ENST00000341372 ISXQ2M1V0 245 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 ZNF658BQ4V348 819 aaPredicted RBP10.03□□□□□ -0.8
TPM3-207ENST00000341372 ZRANB3Q5FWF4 1079 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 TEX35Q5T0J7 233 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 PGBD2Q6P3X8 592 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 TMEM220Q6QAJ8 160 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 PACS1Q6VY07 963 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 RBM44Q6ZP01 1051 aaKnown RBP10.03□□□□□ -0.8
TPM3-207ENST00000341372 CAND1Q86VP6 1230 aaKnown RBP10.03□□□□□ -0.8
TPM3-207ENST00000341372 AMZ2Q86W34 360 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 MARCH9Q86YJ5 346 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 NAT8LQ8N9F0 302 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 ABCG4Q9H172 646 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 ZMAT4Q9H898 229 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 PRDM8Q9NQV8 689 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 BFARQ9NZS9 450 aa10.03□□□□□ -0.8
TPM3-207ENST00000341372 CCDC78A2IDD5 438 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 CTAGE15A4D2H0 777 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 OR51F1A6NGY5 319 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 LILRA5A6NI73 299 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 OR2AG2A6NM03 316 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 B4GAT1O43505 415 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 CSO75390 466 aaKnown RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 POP7O75817 140 aaKnown RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 GOT2P00505 430 aaKnown RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 RPLP0P05388 317 aaKnown RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 PROS1P07225 676 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 CTAGE8P0CG41 777 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 ATP1B2P14415 290 aaPredicted RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 BRAFP15056 766 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 XRCC1P18887 633 aaPredicted RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 IDSP22304 550 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 SESN2P58004 480 aaPredicted RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 SARNPP82979 210 aaKnown RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 RTP5Q14D33 572 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 SLC9B2Q86UD5 537 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 CTAGE6Q86UF2 777 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 CTAGE4Q8IX94 777 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 OR2L2Q8NH16 312 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 ADAMTS18Q8TE60 1221 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 HDAC10Q969S8 669 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 FBXW5Q969U6 566 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 SGF29Q96ES7 293 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 SERPINB12Q96P63 405 aa10.02□□□□□ -0.8
TPM3-207ENST00000341372 GFM1Q96RP9 751 aaKnown RBP10.02□□□□□ -0.8
TPM3-207ENST00000341372 NUDT16L1Q9BRJ7 211 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms