RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RAPSNQ13702 412 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 ATP1A4Q13733 1029 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 TMED2Q15363 201 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 RPS6KA1Q15418 735 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
CAPN3-202ENST00000337571 INPP5JQ15735 1006 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-202ENST00000337571 DEFB110Q30KQ9 67 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 ZC3H12BQ5HYM0 836 aaKnown RBP10.27□□□□□ -0.77
CAPN3-202ENST00000337571 PCID2Q5JVF3 399 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 PTRHD1Q6GMV3 140 aaKnown RBP10.27□□□□□ -0.77
CAPN3-202ENST00000337571 C4orf22Q6V702 233 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 MICALCLQ6ZW33 695 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 GSTA5Q7RTV2 222 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 SLC13A5Q86YT5 568 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-202ENST00000337571 SKA2Q8WVK7 121 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-202ENST00000337571 C1orf54Q8WWF1 131 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 DLG3Q92796 817 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 PNPLA2Q96AD5 504 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 NUDT9Q9BW91 350 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 CASS4Q9NQ75 786 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 CATSPERZQ9NTU4 200 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 C5AR2Q9P296 337 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 GUCA1BQ9UMX6 200 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 TCAF1Q9Y4C2 921 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 MAP4K5Q9Y4K4 846 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 MRFAP1Q9Y605 127 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 SPTBP11277 2137 aa10.27□□□□□ -0.77
CAPN3-202ENST00000337571 BLACEA4D250 179 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CLEC18AA5D8T8 446 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CYSRT1A8MQ03 144 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 PFDN6O15212 129 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CD3EAPO15446 510 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 NDUFS3O75489 264 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 KLF7O75840 302 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 IPO13O94829 963 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 S1PR4O95977 384 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 TPBGLP0DKB5 382 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 ETS1P14921 441 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 GRIA1P42261 906 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 OASLQ15646 514 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 ZIC1Q15915 447 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CYP2A13Q16696 494 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 NKAIN1Q4KMZ8 207 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 SWT1Q5T5J6 900 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 ZNF385CQ66K41 422 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CLEC18BQ6UXF7 455 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 UNC5DQ6UXZ4 953 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 SDCCAG8Q86SQ7 713 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 TMEM139Q8IV31 216 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 MCATQ8IVS2 390 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 DCUN1D3Q8IWE4 304 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 DNAJC22Q8N4W6 341 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 C2orf73Q8N5S3 287 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 OTUD6BQ8N6M0 293 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CLEC18CQ8NCF0 446 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 OR2Y1Q8NGV0 311 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 MAGEC3Q8TD91 643 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 TM9SF4Q92544 642 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 FOPNLQ96NB1 174 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 GBP5Q96PP8 586 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 PANX3Q96QZ0 392 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 SMAD5Q99717 465 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 RAB11FIP5Q9BXF6 653 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CHRAC1Q9NRG0 131 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 EURLQ9NYK6 297 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 DHCR7Q9UBM7 475 aaKnown RBP10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CDYLQ9Y232 598 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
CAPN3-202ENST00000337571 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 CCDC88CQ9P219 2028 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 A0A0U1RQJ8 604 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 IQCF5A8MTL0 148 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 PRMT5O14744 637 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 GPC4O75487 556 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 SORBS2O94875 1100 aaKnown RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 SLCO2B1O94956 709 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 MAGP20916 626 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 AOAHP28039 575 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 CDC25BP30305 580 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 PKLRP30613 574 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 UQCRFS1P47985 274 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 GABRA4P48169 554 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 NPY2RP49146 381 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 SESN2P58004 480 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 ACVR1Q04771 509 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 GRM7Q14831 915 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 MYBPC3Q14896 1274 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 SLC9A5Q14940 896 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 CCNG2Q16589 344 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 FAM214AQ32MH5 1076 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 C4orf17Q53FE4 359 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 TCTE1Q5JU00 501 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 DCAF10Q5QP82 559 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 VWA5B1Q5TIE3 1220 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 IRAK1BP1Q5VVH5 260 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 TTLL10Q6ZVT0 673 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 OTOAQ7RTW8 1153 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms