RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KRT33BQ14525 404 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 PCBP2Q15366 365 aaKnown RBP eCLIP20.87■□□□□ 0.93
TPM1-204ENST00000334895 TCAIMQ8N3R3 496 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 PPFIBP2Q8ND30 876 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 JPH3Q8WXH2 748 aaPredicted RBP20.87■□□□□ 0.93
TPM1-204ENST00000334895 GTPBP2Q9BX10 602 aaKnown RBP20.87■□□□□ 0.93
TPM1-204ENST00000334895 PITPNM3Q9BZ71 974 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 CD244Q9BZW8 370 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 CCDC134Q9H6E4 229 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 MANSC1Q9H8J5 431 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 ICKQ9UPZ9 632 aa20.87■□□□□ 0.93
TPM1-204ENST00000334895 YKT6O15498 198 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 SERPINE1P05121 402 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 BST1Q10588 318 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 FASTKQ14296 549 aaKnown RBP20.86■□□□□ 0.93
TPM1-204ENST00000334895 PTCHD3Q3KNS1 767 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 C6orf132Q5T0Z8 1188 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 ARL14Q8N4G2 192 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 CCNYL1Q8N7R7 359 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 GPR156Q8NFN8 814 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 MAPK15Q8TD08 544 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 PYCR2Q96C36 320 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 NSUN5Q96P11 429 aaKnown RBP20.86■□□□□ 0.93
TPM1-204ENST00000334895 GSTO2Q9H4Y5 243 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 XKR8Q9H6D3 395 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 ZNF395Q9H8N7 513 aaPredicted RBP20.86■□□□□ 0.93
TPM1-204ENST00000334895 PCTPQ9UKL6 214 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 LNP1A1A4G5 178 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 E2F3O00716 465 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 VIPP01282 170 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 NEFHP12036 1026 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 PKLRP30613 574 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 PNLIPRP1P54315 467 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 GPR18Q14330 331 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 CYP2A13Q16696 494 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 RGS9BPQ6ZS82 235 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 RAB44Q7Z6P3 723 aaPredicted RBP20.86■□□□□ 0.93
TPM1-204ENST00000334895 TRIM48Q8IWZ4 208 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 MINDY1Q8N5J2 469 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 LINC01555Q8NAE3 123 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 KYQ8NBH2 561 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 OR56A3Q8NH54 315 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 ZNF483Q8TF39 744 aaPredicted RBP20.86■□□□□ 0.93
TPM1-204ENST00000334895 ATL1Q8WXF7 558 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 C20orf27Q9GZN8 174 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 PARD6AQ9NPB6 346 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 SPATA7Q9P0W8 599 aa20.86■□□□□ 0.93
TPM1-204ENST00000334895 PTPRZ1P23471 2315 aaPredicted RBP20.85■□□□□ 0.93
TPM1-204ENST00000334895 E7ENX8 843 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 TRIM38O00635 465 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 KLF11O14901 512 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 ITM2AO43736 263 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 FASLGP48023 281 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 TAP2Q03519 686 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 NAE1Q13564 534 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.85■□□□□ 0.93
TPM1-204ENST00000334895 SLC9B2Q86UD5 537 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 KLHDC8AQ8IYD2 350 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 LSMEM2Q8N112 164 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 PPP1R14CQ8TAE6 165 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 RAB3IL1Q8TBN0 382 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 LRRC8CQ8TDW0 803 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 ZBTB26Q9HCK0 441 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 SEMA4GQ9NTN9 838 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 NLGN3Q9NZ94 848 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 ADAM21Q9UKJ8 722 aa20.85■□□□□ 0.93
TPM1-204ENST00000334895 TNPO3Q9Y5L0 923 aaKnown RBP20.85■□□□□ 0.93
TPM1-204ENST00000334895 PPM1DO15297 605 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 LYPLA1O75608 230 aaPredicted RBP20.84■□□□□ 0.93
TPM1-204ENST00000334895 STK16O75716 305 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 SUPT7LO94864 414 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 ZNF806P0C7X5 589 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 RAB28P51157 221 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 CDH13P55290 713 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 HHEXQ03014 270 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 ASPHQ12797 758 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 ARHGAP19Q14CB8 494 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 SF3A2Q15428 464 aaKnown RBP20.84■□□□□ 0.93
TPM1-204ENST00000334895 ANKS6Q68DC2 871 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 FRMD7Q6ZUT3 714 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 TRIM42Q8IWZ5 723 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 SLC35F3Q8IY50 421 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 SYTL1Q8IYJ3 562 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 ZFPM2Q8WW38 1151 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 SREK1Q8WXA9 508 aaKnown RBP20.84■□□□□ 0.93
TPM1-204ENST00000334895 CAPS2Q9BXY5 557 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 INTS7Q9NVH2 962 aaKnown RBP20.84■□□□□ 0.93
TPM1-204ENST00000334895 GVINP1Q7Z2Y8 2422 aa20.84■□□□□ 0.93
TPM1-204ENST00000334895 PPP6CO00743 305 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 PCDHGA12O60330 932 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 CCNT2O60583 730 aaKnown RBP20.83■□□□□ 0.93
TPM1-204ENST00000334895 SNNO75324 88 aaPredicted RBP20.83■□□□□ 0.93
TPM1-204ENST00000334895 H2AFYO75367 372 aaKnown RBP20.83■□□□□ 0.93
TPM1-204ENST00000334895 TSPAN8P19075 237 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 EPORP19235 508 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 TGM1P22735 817 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 GRK2P25098 689 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 TBPL1P62380 186 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 STX3Q13277 289 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 C14orf28Q4W4Y0 310 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms