RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ATP1B2P14415 290 aaPredicted RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PREPP48147 710 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 CLCN2P51788 898 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 SLC14A1Q13336 389 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 DYNC1I2Q13409 638 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 LAPTM4AQ15012 233 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 NEDD8Q15843 81 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 CCSMST1Q4G0I0 132 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ARSIQ5FYB1 569 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 AP1ARQ63HQ0 302 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ANKRD26P1Q6NSI1 321 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ELMOD1Q8N336 334 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ING5Q8WYH8 240 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 SGCDQ92629 289 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 MTERF1Q99551 399 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 GNGT2O14610 69 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 GRM6O15303 877 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 FOXD2O60548 495 aaPredicted RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 LEFTY1O75610 366 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 CST1P01037 141 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ALBP02768 609 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 CLTBP09497 229 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 RAP2AP10114 183 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 CTSAP10619 480 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 MSH3P20585 1137 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 PBLDP30039 288 aaPredicted RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ARSFP54793 590 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 GDPD4Q6W3E5 623 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ASB11Q8WXH4 323 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 TCF25Q9BQ70 676 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 RDH14Q9HBH5 336 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ELOVL7A1L3X0 281 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 DYTNA2CJ06 578 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 TRIM43BA6NCK2 446 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 PABPN1LA6NDY0 278 aaKnown RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 CXCR6O00574 342 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ASLP04424 464 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 EEF1B2P24534 225 aaKnown RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 SHMT2P34897 504 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 FXNQ16595 210 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 SPATS1Q496A3 300 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 OR4F3Q6IEY1 312 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ZBTB46Q86UZ6 589 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 OR8J3Q8NGG0 315 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 NETO1Q8TDF5 533 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 UBTD2Q8WUN7 234 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 TRIM43Q96BQ3 446 aaPredicted RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 MCCC1Q96RQ3 725 aaPredicted RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 RIOK2Q9BVS4 552 aaKnown RBP18.44■□□□□ 0.54
RFTN1-201ENST00000334133 EXD2Q9NVH0 621 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 ITM2BQ9Y287 266 aa18.44■□□□□ 0.54
RFTN1-201ENST00000334133 DENND4CQ5VZ89 1909 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 DEAF1O75398 565 aaPredicted RBP18.43■□□□□ 0.54
RFTN1-201ENST00000334133 IL6P05231 212 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 SDC1P18827 310 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 S100A3P33764 101 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 MAD2L1Q13257 205 aaPredicted RBP18.43■□□□□ 0.54
RFTN1-201ENST00000334133 TSTA3Q13630 321 aaPredicted RBP18.43■□□□□ 0.54
RFTN1-201ENST00000334133 LILRA6Q6PI73 481 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 ABRAXAS1Q6UWZ7 409 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 SPRED2Q7Z698 418 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 PNPT1Q8TCS8 783 aaKnown RBP18.43■□□□□ 0.54
RFTN1-201ENST00000334133 HM13Q8TCT9 377 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 SLC47A1Q96FL8 570 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 MED8Q96G25 268 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.43■□□□□ 0.54
RFTN1-201ENST00000334133 PKD2L2Q9NZM6 624 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 ZNF510Q9Y2H8 683 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 CHIT1Q13231 466 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 PMS2P3Q13401 168 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 ADRM1Q16186 407 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 LRRC26Q2I0M4 334 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 SPESP1Q6UW49 350 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 ADIPOR2Q86V24 386 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 TOX2Q96NM4 488 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 SLC12A9Q9BXP2 914 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 CHD9Q3L8U1 2897 aa18.43■□□□□ 0.54
RFTN1-201ENST00000334133 A0A087WXM4 84 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 RECQLP46063 649 aaPredicted RBP18.42■□□□□ 0.54
RFTN1-201ENST00000334133 RUNDC3AQ59EK9 446 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 GPR141Q7Z602 305 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 ZSWIM3Q96MP5 696 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 PAIP1Q9H074 479 aaKnown RBP18.42■□□□□ 0.54
RFTN1-201ENST00000334133 FAM83DQ9H4H8 585 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 POLR1BQ9H9Y6 1135 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 SERHLQ9NQF3 203 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 FADS2P1A8MWK0 482 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 SERPINA1P01009 418 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 CYP2U1Q7Z449 544 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 TMEM179BQ7Z7N9 219 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 PATL1Q86TB9 770 aaKnown RBP18.42■□□□□ 0.54
RFTN1-201ENST00000334133 OR7A2PQ8NGA2 310 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 FAM120BQ96EK7 910 aaKnown RBP18.42■□□□□ 0.54
RFTN1-201ENST00000334133 NAA50Q9GZZ1 169 aaKnown RBP18.42■□□□□ 0.54
RFTN1-201ENST00000334133 PCDH12Q9NPG4 1184 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 VPS4AQ9UN37 437 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 G3V2T6 193 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 IL7RP16871 459 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 PON2Q15165 354 aa18.42■□□□□ 0.54
RFTN1-201ENST00000334133 ZNF551Q7Z340 670 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms