RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PRG2P13727 222 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 TACR2P21452 398 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 MATN1P21941 496 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ZNF157P51786 506 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 MVKQ03426 396 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 CLCA4Q14CN2 919 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 LRRC73Q5JTD7 316 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ATXN7L2Q5T6C5 722 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 USP45Q70EL2 814 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 KRTCAP2Q8N6L1 136 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 TMEM102Q8N9M5 508 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 HJURPQ8NCD3 748 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 KIAA1191Q96A73 305 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ZFP3Q96NJ6 502 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SLC25A13Q9UJS0 675 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 GLYATL1P3A0A0U1RQE8 302 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 BTBD19C9JJ37 291 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 EFCAB14O75071 495 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 MMP3P08254 477 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SCNN1AP37088 669 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 LRP8Q14114 963 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SUZ12Q15022 739 aaKnown RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 IQCCQ4KMZ1 466 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 LCN8Q6JVE9 175 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ZNF534Q76KX8 674 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SYVN1Q86TM6 617 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SH3YL1Q96HL8 342 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 PCDHGA8Q9Y5G5 932 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ANKRD33BA6NCL7 494 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 H7C4K7 107 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SOX14O95416 240 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 FPR1P21462 350 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 OR1E2P47887 323 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 MRPS6P82932 125 aaKnown RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 NFKB2Q00653 900 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 WSCD2Q2TBF2 565 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 FBXL22Q6P050 247 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 C14orf80Q86SX3 495 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CDK20Q8IZL9 346 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 PKP4Q99569 1192 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SLC30A3Q99726 388 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SLC22A4Q9H015 551 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 DSN1Q9H410 356 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ADARB2Q9NS39 739 aaKnown RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 COQ3Q9NZJ6 369 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CPQQ9Y646 472 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CLCA3PQ9Y6N3 262 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 M0QX08 132 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 FUCA1P04066 466 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 PRSS56P0CW18 603 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 PPIBP23284 216 aaKnown RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SDC2P34741 201 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CD68P34810 354 aaPredicted RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 RORCP51449 518 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 TUSC3Q13454 348 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 RAPSNQ13702 412 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 KCNJ8Q15842 424 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 DUSP28Q4G0W2 176 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 BICRALQ6AI39 1079 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 OR5AK3PQ8NH89 298 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 TEX47Q8TBZ9 253 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CLP1Q92989 425 aaKnown RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 C8orf48Q96LL4 319 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 MMP27Q9H306 513 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ANKRA2Q9H9E1 313 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ARMC1Q9NVT9 282 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CD84Q9UIB8 345 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 USP22Q9UPT9 525 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 CORO2BQ9UQ03 480 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 FCF1Q9Y324 198 aaKnown RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 PCDHB1Q9Y5F3 818 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ZSCAN5BA6NJL1 495 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 SGTAO43765 313 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 PRPS2P11908 318 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 HSD17B1P14061 328 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 IFI44LQ53G44 452 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ANXA8L1Q5VT79 327 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 KIAA1614Q5VZ46 1190 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 MSANTD2Q6P1R3 559 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 FAM110BQ8TC76 370 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 MYO19Q96H55 970 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 HSH2DQ96JZ2 352 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 HS3ST4Q9Y661 456 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 DNMT3AQ9Y6K1 912 aaPredicted RBP13.74□□□□□ -0.21
EPHB3-201ENST00000330394 NUP98P52948 1817 aa13.74□□□□□ -0.21
EPHB3-201ENST00000330394 OR1I1O60431 355 aa13.73□□□□□ -0.21
EPHB3-201ENST00000330394 CCNB2O95067 398 aa13.73□□□□□ -0.21
EPHB3-201ENST00000330394 POLR2IP36954 125 aaKnown RBP13.73□□□□□ -0.21
EPHB3-201ENST00000330394 PTGER3P43115 390 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms