RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 ZSCAN5AQ9BUG6 496 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 BTBD19C9JJ37 291 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 IFNA10P01566 189 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ARP10275 920 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 MATN1P21941 496 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 FAM198BQ6UWH4 519 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SLC30A10Q6XR72 485 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ZBTB46Q86UZ6 589 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 RAVER1Q8IY67 606 aaKnown RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 GATAD2BQ8WXI9 593 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 FEM1CQ96JP0 617 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 TAS2R8Q9NYW2 309 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SNX10Q9Y5X0 201 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SPIN1Q9Y657 262 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 EI24O14681 340 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 S100A10P60903 97 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ALG10BQ5I7T1 473 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 CERCAMQ5T4B2 595 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 CHCHD4Q8N4Q1 142 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 OR5B12Q96R08 314 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 MOCS1Q9NZB8 636 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 PRR36Q9H6K5 1346 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 A0A0G2JMP0 313 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SH3BGRLO75368 114 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 OAZ2O95190 189 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 PTGER3P43115 390 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 MARCKSL1P49006 195 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 PPATQ06203 517 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 OR4M2Q8NGB6 313 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 GAD1Q99259 594 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SLC6A16Q9GZN6 736 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 LOC100130705A0A1B0GUX0 176 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 C2orf74A8MZ97 194 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ADAMTS3O15072 1205 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 GABBR2O75899 941 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 RCBTB2O95199 551 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 IFNA17P01571 189 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 IL7RP16871 459 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 CPN2P22792 545 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 CDKN2BP42772 138 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 MRPS5P82675 430 aaKnown RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 COQ8BQ96D53 544 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 MAELQ96JY0 434 aaKnown RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 TMEM39BQ9GZU3 492 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 PRDM12Q9H4Q4 367 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ARL5CA6NH57 179 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SCN2BO60939 215 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 NDST3O95803 873 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ITGB1P05556 798 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 CYP3A5P20815 502 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 VAMP1P23763 118 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 CYCSP99999 105 aaKnown RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 NOMO1Q15155 1222 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 PLEKHH3Q7Z736 793 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 RALGPS2Q86X27 583 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 TOP6BLQ8N6T0 577 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 PPP1R13LQ8WUF5 828 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-201ENST00000328333 HCN3Q9P1Z3 774 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 COL1A2P08123 1366 aa14.01□□□□□ -0.17
COL7A1-201ENST00000328333 ATRXP46100 2492 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 SLIT3O75094 1523 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 TGM6O95932 706 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 MT-ND5P03915 603 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 DBIP07108 87 aaKnown RBP14□□□□□ -0.17
COL7A1-201ENST00000328333 INSRRP14616 1297 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 PCDH1Q08174 1060 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 CYP1B1Q16678 543 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 ANKDD1AQ495B1 522 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 C10orf82Q8WW14 230 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 FDXACB1Q9BRP7 624 aaPredicted RBP14□□□□□ -0.17
COL7A1-201ENST00000328333 OSBPL7Q9BZF2 842 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 ENY2Q9NPA8 101 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 TRPM6Q9BX84 2022 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 GLYATL1P3A0A0U1RQE8 302 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 SPAM1P38567 509 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 TGFB2P61812 414 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 DOK6Q6PKX4 331 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 ZNF514Q96K75 400 aaPredicted RBP14□□□□□ -0.17
COL7A1-201ENST00000328333 CPXM1Q96SM3 734 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 ASAH2Q9NR71 780 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 AGAP5A6NIR3 686 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 RGS6P49758 472 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 NCS1P62166 190 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 CRB2Q5IJ48 1285 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 TMEM53Q6P2H8 277 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 TMPRSS11BQ86T26 416 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 WDSUB1Q8N9V3 476 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 OR6K6Q8NGW6 343 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 MFSD8Q8NHS3 518 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 TBC1D15Q8TC07 691 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 KATNBL1Q9H079 304 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 SHPRHQ149N8 1683 aa14□□□□□ -0.17
COL7A1-201ENST00000328333 FAM86B1E9PN63 330 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms