RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DGKKQ5KSL6 1271 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 THOC6Q86W42 341 aaKnown RBP11.17□□□□□ -0.62
COL4A5-201ENST00000328300 GDE1Q9NZC3 331 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ATXN10Q9UBB4 475 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 MYH13Q9UKX3 1938 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ACP5P13686 325 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 MYL9P24844 172 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 HOXC13P31276 330 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 LMAN2Q12907 356 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 TOMM20Q15388 145 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 HKDC1Q2TB90 917 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF730Q6ZMV8 503 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 PARGQ86W56 976 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 LPGAT1Q92604 370 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 SMPD3Q9NY59 655 aaPredicted RBP11.17□□□□□ -0.62
COL4A5-201ENST00000328300 LYVE1Q9Y5Y7 322 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 PAPPAQ13219 1627 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 MANBAO00462 879 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 CXCR6O00574 342 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ENTPD5O75356 428 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 RAP2AP10114 183 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 GPRC6AQ5T6X5 926 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 PTCHD4Q6ZW05 846 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 VN1R5Q7Z5H4 357 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 THAP5Q7Z6K1 395 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ARL10Q8N8L6 244 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 OR56A1Q8NGH5 318 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 SLC5A11Q8WWX8 675 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 PPM1MQ96MI6 270 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 TCRBV7S3A2A0A539 114 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 RSL1D1O76021 490 aaKnown RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CCNB2O95067 398 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ELOCQ15369 112 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 TMEM164Q5U3C3 297 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 LIPJQ5W064 366 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 METTL2BQ6P1Q9 378 aaKnown RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ADGRD2Q7Z7M1 963 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 JAZF1Q86VZ6 243 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 COMMD2Q86X83 199 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 SMYD1Q8NB12 490 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 OR10H5Q8NGA6 315 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 XAGE5Q8WWM1 108 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 DNASE1L2Q92874 299 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NSMCE3Q96MG7 304 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GPATCH1Q9BRR8 931 aaKnown RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 RERGLQ9H628 205 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 RMI1Q9H9A7 625 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 DNAJB9Q9UBS3 223 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 A0A1W2PRB8 838 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 PTGES3LE9PB15 166 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 MAPK11Q15759 364 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NRF1Q16656 503 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 RTP2Q5QGT7 225 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 PIK3R6Q5UE93 754 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 OR7A2PQ8NGA2 310 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 TFGQ92734 400 aaPredicted RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CLIP3Q96DZ5 547 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 HCN3Q9P1Z3 774 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CAPN8A6NHC0 703 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 AHCYL1O43865 530 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 KRT33AO76009 404 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ALOX5P09917 674 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GSTT1P30711 240 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GATMP50440 423 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 EMX2Q04743 252 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 C2orf27AQ580R0 203 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CDKL4Q5MAI5 379 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CYB5D2Q8WUJ1 264 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 TMEM45AQ9NWC5 275 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 C9J4A7 227 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 TMCC2O75069 709 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 APBB3O95704 486 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ANXA8P13928 327 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 IGFBP5P24593 272 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CSNK1DP48730 415 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 FOLH1Q04609 750 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NFATC2Q13469 925 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 MZT2BQ6NZ67 158 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GSTCDQ8NEC7 633 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ADAMTS18Q8TE60 1221 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GIPC3Q8TF64 312 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 SETD7Q8WTS6 366 aaKnown RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF382Q96SR6 550 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CD244Q9BZW8 370 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 REXO4Q9GZR2 422 aaKnown RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 KCNN2Q9H2S1 579 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 MATN2O00339 956 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GRID2O43424 1007 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 MAFKO60675 156 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NR2C1P13056 603 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ENDOUP21128 410 aaKnown RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 IL12BP29460 328 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 IL12RB1P42701 662 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NRG3P56975 720 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF527Q8NB42 609 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms