RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 VPS35Q96QK1 796 aa11.33□□□□□ -0.6
CDCA8-201ENST00000327331 PAIP1Q9H074 479 aaKnown RBP11.33□□□□□ -0.6
CDCA8-201ENST00000327331 GSTO2Q9H4Y5 243 aa11.33□□□□□ -0.6
CDCA8-201ENST00000327331 TM7SF3Q9NS93 570 aa11.33□□□□□ -0.6
CDCA8-201ENST00000327331 TUBA8Q9NY65 449 aaPredicted RBP11.33□□□□□ -0.6
CDCA8-201ENST00000327331 TSC22D4Q9Y3Q8 395 aa11.33□□□□□ -0.6
CDCA8-201ENST00000327331 TRPM6Q9BX84 2022 aa11.33□□□□□ -0.6
CDCA8-201ENST00000327331 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 LOC730098B7Z3J9 87 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 STAMBPO95630 424 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 FUCA1P04066 466 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 ZNF8P17098 575 aaPredicted RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 GABRG2P18507 467 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 PDHA2P29803 388 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 PXNP49023 591 aaPredicted RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 RGS4P49798 205 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 CLEC6AQ6EIG7 209 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 ZFP1Q6P2D0 407 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 PNCKQ6P2M8 343 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 SLC2A7Q6PXP3 512 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 CYHR1Q6ZMK1 362 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 ARMCX6Q7L4S7 300 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 LILRA2Q8N149 483 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 FRMD1Q8N878 549 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 SCAIQ8N9R8 606 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 RHEBL1Q8TAI7 183 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 CAAP1Q9H8G2 361 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 SEMA4BQ9NPR2 832 aaPredicted RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 SLC2A4RGQ9NR83 387 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 KCTD5Q9NXV2 234 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 NFKBIL1Q9UBC1 381 aaPredicted RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 EIF2B4Q9UI10 523 aaKnown RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 PACSIN3Q9UKS6 424 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 TMEM114B3SHH9 223 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 PLRG1O43660 514 aaKnown RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 SNX2O60749 519 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 COX4I1P13073 169 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 IMPDH1P20839 514 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 CD9P21926 228 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 GDF5P43026 501 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 ABRQ12979 859 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 GAS6Q14393 721 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 CRY1Q16526 586 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 SYTL3Q4VX76 610 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 MFSD4BQ5TF39 518 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 NANOGNBQ7Z5D8 188 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 KCNA7Q96RP8 456 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 EGFL8Q99944 293 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
CDCA8-201ENST00000327331 CDH19Q9H159 772 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 LMAN1LQ9HAT1 526 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 EBF1Q9UH73 591 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 FBXL21Q9UKT6 434 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 MMP17Q9ULZ9 603 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 DUSP12Q9UNI6 340 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 RNF11Q9Y3C5 154 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
CDCA8-201ENST00000327331 K7EPI3 171 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 LATO43561 262 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 H6PDO95479 791 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 CHRNB1P11230 501 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 NCF2P19878 526 aaPredicted RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 IDH3AP50213 366 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 TPMTP51580 245 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 CLDN2P57739 230 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 DNAJB13P59910 316 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 HERVK_113P63132 956 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 DPTQ07507 201 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ILF2Q12905 390 aaKnown RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 SGCGQ13326 291 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 FLOT2Q14254 428 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 PPP1R3AQ16821 1122 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ZNF829Q3KNS6 432 aaPredicted RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 TTLL9Q3SXZ7 439 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 SLC9B1Q4ZJI4 515 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 EOGTQ5NDL2 527 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ZNF852Q6ZMS4 543 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 CUZD1Q86UP6 607 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 CLVS1Q8IUQ0 354 aaPredicted RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ZNF547Q8IVP9 402 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 SIX5Q8N196 739 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 PLEKHA8Q96JA3 519 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 PKP2Q99959 881 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ERVK-6Q9BXR3 956 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ILKAPQ9H0C8 392 aaPredicted RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 ARMC7Q9H6L4 198 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 WDR55Q9H6Y2 383 aaPredicted RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 COG4Q9H9E3 785 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 TRNAU1APQ9NX07 287 aaKnown RBP11.31□□□□□ -0.6
CDCA8-201ENST00000327331 CDYLQ9Y232 598 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 H0Y8X5 98 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 H3BNH8 94 aa11.31□□□□□ -0.6
CDCA8-201ENST00000327331 LSM1O15116 133 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms