RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NEK10Q6ZWH5 1172 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 SPDYE1Q8NFV5 336 aaPredicted RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 CADM1Q9BY67 442 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 MMADHCQ9H3L0 296 aaPredicted RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 TRNAU1APQ9NX07 287 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 PSMD13Q9UNM6 376 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 E2F3O00716 465 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 RPL10P27635 214 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 PLOD1Q02809 727 aaPredicted RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 CDC16Q13042 620 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 RPA4Q13156 261 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 CDKL4Q5MAI5 379 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 METTL2BQ6P1Q9 378 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 CHSY3Q70JA7 882 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 NRROSQ86YC3 692 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 ARHGAP24Q8N264 748 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 DLG3Q92796 817 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 DPEP2Q9H4A9 486 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 R4GN57 208 aa18.26■□□□□ 0.51
EXOSC3-201ENST00000327304 KCNJ13O60928 360 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 CELA2BP08218 269 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 GNSP15586 552 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 JUNDP17535 347 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 AGTR2P50052 363 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 NUBP1P53384 320 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 LRP8Q14114 963 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 TEAD4Q15561 434 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 PRAMEF14Q5SWL7 426 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 CLEC6AQ6EIG7 209 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 PARP9Q8IXQ6 854 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 RBM15BQ8NDT2 890 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 CFAP61Q8NHU2 1237 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 ASB11Q8WXH4 323 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 HGH1Q9BTY7 390 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 NUSAP1Q9BXS6 441 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 ZBTB26Q9HCK0 441 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 UTP6Q9NYH9 597 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 PTBP2Q9UKA9 531 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 WDR37Q9Y2I8 494 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 DNAJC15Q9Y5T4 150 aa18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 TP53BP1Q12888 1972 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-201ENST00000327304 ZFC3H1O60293 1989 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 PPP6CO00743 305 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 MATN4O95460 622 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 ESRRBO95718 433 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 CSF2P04141 144 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 NME1P15531 152 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 ACADLP28330 430 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 CPA2P48052 419 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 CLCNKAP51800 687 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 PKNOX1P55347 436 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 BNC1Q01954 994 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 PHKG1Q16816 387 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 PEAR1Q5VY43 1037 aaPredicted RBP18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 SULT1C3Q6IMI6 304 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 SLC30A9Q6PML9 568 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 EFL1Q7Z2Z2 1120 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 PDZD3Q86UT5 571 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 SYT12Q8IV01 421 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 RASGRP3Q8IV61 690 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 MCUR1Q96AQ8 359 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 C19orf60Q96EN9 201 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 LRRC61Q9BV99 259 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 SEMA4BQ9NPR2 832 aaPredicted RBP18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 PRDM8Q9NQV8 689 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 SUSD2Q9UGT4 822 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 APOBEC3BQ9UH17 382 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 ACSL5Q9ULC5 683 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 VPS13AQ96RL7 3174 aa18.24■□□□□ 0.51
EXOSC3-201ENST00000327304 GIPC1O14908 333 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 ENO2P09104 434 aaPredicted RBP18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 THRAP10827 490 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 COX4I1P13073 169 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 IDSP22304 550 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 PIK3R1P27986 724 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 ACTR1BP42025 376 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 BLKP51451 505 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 ACTR1AP61163 376 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 KIF19Q2TAC6 998 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 UBE2R2Q712K3 238 aaPredicted RBP18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 LARP4Q71RC2 724 aaKnown RBP eCLIP18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 CHCHD4Q8N4Q1 142 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 GPBAR1Q8TDU6 330 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 TWIST2Q8WVJ9 160 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 ZNF382Q96SR6 550 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 ZDHHC5Q9C0B5 715 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 TBC1D29Q9UFV1 150 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 CACNA1EQ15878 2313 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 CACNA1HO95180 2353 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 KRT87PA6NCN2 255 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 PDZK1P1A8MUH7 402 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 GFYI3L273 518 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 EML2O95834 649 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 C8GP07360 202 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 SLC35G4P0C7Q5 338 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 UROSP10746 265 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 CTSKP43235 329 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 CDKL1Q00532 357 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms