RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 FDXRP22570 491 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 HTR1BP28222 390 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 RPS9P46781 194 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 MAPK12P53778 367 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ERVFC1P60507 584 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 PDGFRLQ15198 375 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 LDLRAP1Q5SW96 308 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 CRTC1Q6UUV9 634 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 GAREM2Q75VX8 874 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 NANOGNBQ7Z5D8 188 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 HMGN2P46Q86SG4 172 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 GPR26Q8NDV2 337 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 SHKBP1Q8TBC3 707 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 DOK4Q8TEW6 326 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 PLEKHG4BQ96PX9 1271 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 MRM3Q9HC36 420 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 MKS1Q9NXB0 559 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TAC3Q9UHF0 121 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 CLEC4EQ9ULY5 219 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 SPACA6W5XKT8 324 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 FAM234BA2RU67 622 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 PRORSD1PA6NEY8 169 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 GLOD5A6NK44 160 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 FAM220BPB1ANY3 271 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 BCL10O95999 233 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 FUT4P22083 530 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 VARSP26640 1264 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 CCNIQ14094 377 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 LIN52Q52LA3 116 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 BRAT1Q6PJG6 821 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 GATAD2AQ86YP4 633 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 RNF175Q8N4F7 328 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 DEFB119Q8N690 84 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 KAT2AQ92830 837 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ASB9Q96DX5 294 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 PRICKLE1Q96MT3 831 aaPredicted RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 SLC30A3Q99726 388 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 MAGEE1Q9HCI5 957 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TBC1D23Q9NUY8 699 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 SELENONQ9NZV5 590 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.55□□□□□ -0.56
DDR1-223ENST00000324771 LYVE1Q9Y5Y7 322 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 CARNS1A5YM72 827 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TULP3O75386 442 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 PRAMEF12O95522 483 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 KLK1P06870 262 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 C8GP07360 202 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ATXN1LP0C7T5 689 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 HPGDP15428 266 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ACTR1BP42025 376 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TMED10P49755 219 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 NUP107P57740 925 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ERVPABLB-1P60509 514 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ACTR1AP61163 376 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ATAD3BQ5T9A4 648 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 DEPDC1Q5TB30 811 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 AHI1Q8N157 1196 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TMEM145Q8NBT3 493 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 KCT2Q8NC54 265 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 HMGB4Q8WW32 186 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 TFGQ92734 400 aaPredicted RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 NUSAP1Q9BXS6 441 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 CARS2Q9HA77 564 aaKnown RBP11.55□□□□□ -0.56
DDR1-223ENST00000324771 FBXL12Q9NXK8 326 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 VPS29Q9UBQ0 182 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 ARFGEF1Q9Y6D6 1849 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 A0A1W2PP18 115 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 MANBAO00462 879 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 ZW10O43264 779 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 MYOGP15173 224 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 IDSP22304 550 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 ALDH4A1P30038 563 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 HLA-FP30511 346 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 VIPR1P32241 457 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 MAGEA3P43357 314 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 VN1R5Q7Z5H4 357 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 THOC6Q86W42 341 aaKnown RBP11.54□□□□□ -0.56
DDR1-223ENST00000324771 GALNT13Q8IUC8 556 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
DDR1-223ENST00000324771 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 UBE2E3Q969T4 207 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 ROPN1LQ96C74 230 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 CENPNQ96H22 339 aaPredicted RBP11.54□□□□□ -0.56
DDR1-223ENST00000324771 SPACA7Q96KW9 195 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 AIF1LQ9BQI0 150 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 ADI1Q9BV57 179 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 C6orf62Q9GZU0 229 aaPredicted RBP11.54□□□□□ -0.56
DDR1-223ENST00000324771 PNPLA3Q9NST1 481 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 GULP1Q9UBP9 304 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 ERVW-1Q9UQF0 538 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 PCDHGA11Q9Y5H2 935 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 RP1P56715 2156 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 MAGEB17A8MXT2 336 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 PCDH7O60245 1069 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 CTSAP10619 480 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 PTNP21246 168 aa11.54□□□□□ -0.56
DDR1-223ENST00000324771 NTSP30990 170 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms