RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ZNF687Q8N1G0 1237 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 OXR1Q8N573 874 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 FNDC5Q8NAU1 212 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 KYQ8NBH2 561 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 OR56A3Q8NH54 315 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 USP7Q93009 1102 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 EBF2Q9HAK2 575 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 CA14Q9ULX7 337 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 SCML1Q9UN30 329 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 WDR37Q9Y2I8 494 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 PDYNP01213 254 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 ACP5P13686 325 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 CAPN3P20807 821 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 UFM1P61960 85 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 ERVK-8P63133 956 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 TBL3Q12788 808 aaKnown RBP17.89■□□□□ 0.45
USP39-201ENST00000323701 CHIT1Q13231 466 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 GAS6Q14393 721 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 NR6A1Q15406 480 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 FBXO43Q4G163 708 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 ATP6AP1LQ52LC2 224 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 METRNLQ641Q3 311 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 PGM2L1Q6PCE3 622 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 RGL4Q8IZJ4 473 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 MIER2Q8N344 545 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 L3MBTL4Q8NA19 623 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 IL17FQ96PD4 163 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 APOOQ9BUR5 198 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 SLC52A3Q9NQ40 469 aa17.89■□□□□ 0.45
USP39-201ENST00000323701 PHPT1Q9NRX4 125 aaPredicted RBP17.89■□□□□ 0.45
USP39-201ENST00000323701 SNRPB2P08579 225 aaKnown RBP17.88■□□□□ 0.45
USP39-201ENST00000323701 CHRNB1P11230 501 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 TEAD1P28347 426 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 IL12AP29459 219 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 ACADVLP49748 655 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 STX1BP61266 288 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 PRKG2Q13237 762 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 ZRSR2Q15696 482 aaKnown RBP17.88■□□□□ 0.45
USP39-201ENST00000323701 AP5B1Q2VPB7 878 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 REP15Q6BDI9 236 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 ADNP2Q6IQ32 1131 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 DUS1LQ6P1R4 473 aaKnown RBP17.88■□□□□ 0.45
USP39-201ENST00000323701 TTC23LQ6PF05 361 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 TRIM46Q7Z4K8 759 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 PDZD3Q86UT5 571 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 KBTBD6Q86V97 674 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 HPS6Q86YV9 775 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 C2orf73Q8N5S3 287 aaPredicted RBP17.88■□□□□ 0.45
USP39-201ENST00000323701 ACPTQ9BZG2 426 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 ACTL8Q9H568 366 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 CXorf56Q9H5V9 222 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 RIC8BQ9NVN3 520 aa17.88■□□□□ 0.45
USP39-201ENST00000323701 NKX1-2Q9UD57 310 aaPredicted RBP17.88■□□□□ 0.45
USP39-201ENST00000323701 MYO15AQ9UKN7 3530 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 GON4LQ3T8J9 2241 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 NR5A2O00482 541 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 IDO1P14902 403 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 HALP42357 657 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 YBX1P67809 324 aaKnown RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 MLF2Q15773 248 aaPredicted RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 VPS26BQ4G0F5 336 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 SUSD1Q6UWL2 747 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 SPATA19Q7Z5L4 167 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 LRRC56Q8IYG6 542 aaPredicted RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 FRMD1Q8N878 549 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 FBXO15Q8NCQ5 510 aaPredicted RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 CCT7Q99832 543 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 BRINP2Q9C0B6 783 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 FGF22Q9HCT0 170 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 PNMA8BQ9ULN7 279 aaPredicted RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 SUFUQ9UMX1 484 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 KCNK6Q9Y257 313 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 ASF1AQ9Y294 204 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 NCKAP1Q9Y2A7 1128 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 SLC17A4Q9Y2C5 497 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 KMOO15229 486 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 RSL1D1O76021 490 aaKnown RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 G6PDP11413 515 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 TBPL1P62380 186 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 LRP8Q14114 963 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 TCEA2Q15560 299 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 RIPOR1Q6ZS17 1223 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 SYTL1Q8IYJ3 562 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 OR9A1PQ8NGU1 263 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 TFGQ92734 400 aaPredicted RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 CCDC124Q96CT7 223 aaKnown RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
USP39-201ENST00000323701 SLC39A3Q9BRY0 314 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 EFCAB1Q9HAE3 211 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 PRDM6Q9NQX0 595 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 KNL1Q8NG31 2342 aa17.87■□□□□ 0.45
USP39-201ENST00000323701 E7ENX8 843 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 CFLARO15519 480 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 FOSL2P15408 326 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 TAP2Q03519 686 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 TSTA3Q13630 321 aaPredicted RBP17.86■□□□□ 0.45
USP39-201ENST00000323701 DOC2AQ14183 400 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 GSTA3Q16772 222 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 GGTA1PQ4G0N0 100 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 HABP4Q5JVS0 413 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms