RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MTM1Q13496 603 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CAPN13Q6MZZ7 669 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 DNM1P34Q6PK57 102 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CYP2R1Q6VVX0 501 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 OR2T34Q8NGX1 318 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 OR2T3Q8NH03 318 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CXorf40BQ96DE9 158 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SENP8Q96LD8 212 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 DUSP16Q9BY84 665 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SH3PXD2BA1X283 911 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 EFCAB9A8MZ26 197 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ALOX15BO15296 676 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 AGR2O95994 175 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ALPPP05187 535 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 PSMB4P28070 264 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 LSM3P62310 102 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 XKR6Q5GH73 641 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 KCNIP4Q6PIL6 250 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 GCNT7Q6ZNI0 430 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 PHYKPLQ8IUZ5 450 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 COPS8Q99627 209 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 OR1I1O60431 355 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 MPIP34949 423 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 MON1AQ86VX9 555 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 MARVELD2Q8N4S9 558 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 PTGR2Q8N8N7 351 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 BIRC8Q96P09 236 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 GMEB2Q9UKD1 530 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 PLLPQ9Y342 182 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ETFAP13804 333 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 RPS3P23396 243 aaKnown RBP eCLIP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 STXBP1P61764 594 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 UAP1L1Q3KQV9 507 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 EIPR1Q53HC9 387 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 TMEM161BQ8NDZ6 487 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 OR2M2Q96R28 347 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 TREX2Q9BQ50 279 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CXorf21Q9HAI6 301 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 AGAP14A8MT82 685 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 LCMT2O60294 686 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ZBED5Q49AG3 693 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ELMO3Q96BJ8 720 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 KAT8Q9H7Z6 458 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 HCN3Q9P1Z3 774 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 RBM7Q9Y580 266 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 HMGN1P05114 100 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CHATP28329 748 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 PGAM4Q8N0Y7 254 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 PQLC1Q8N2U9 271 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 KIF13AQ9H1H9 1805 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 C17orf113A0A1B0GUU1 675 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 XKRYO14609 159 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CD9P21926 228 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 MAPK3P27361 379 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 IFI35P80217 286 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 GINS1Q14691 196 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 NDUFA9Q16795 377 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 TFAP2DQ7Z6R9 452 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 TTLQ8NG68 377 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 MAELQ96JY0 434 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 BTN2A3PQ96KV6 586 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 HYLS1Q96M11 299 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 LGMNQ99538 433 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SLC30A2Q9BRI3 323 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 EIF5A2Q9GZV4 153 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 AP5Z1O43299 807 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 KLHDC10Q6PID8 442 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 RANBP3LQ86VV4 465 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CPT1BQ92523 772 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 EDEM1Q92611 657 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 OR7A17O14581 309 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 FARS2O95363 451 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CBX6O95503 412 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SPIBQ01892 262 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 AUHQ13825 339 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 EIF2B1Q14232 305 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SLC39A4Q6P5W5 647 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 USP50Q70EL3 339 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 C2orf15Q8WU43 125 aaKnown RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 OR8D1Q8WZ84 308 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SLC38A4Q969I6 547 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CHIAQ9BZP6 476 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 SMPD3Q9NY59 655 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-201ENST00000322507 FKBP7Q9Y680 259 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 C2orf78A6NCI8 922 aa9.54□□□□□ -0.88
COL12A1-201ENST00000322507 LIPEQ05469 1076 aa9.54□□□□□ -0.88
COL12A1-201ENST00000322507 RASGEF1BQ0VAM2 473 aa9.54□□□□□ -0.88
COL12A1-201ENST00000322507 SLC36A4Q6YBV0 504 aa9.54□□□□□ -0.88
COL12A1-201ENST00000322507 NUDT4Q9NZJ9 180 aa9.54□□□□□ -0.88
COL12A1-201ENST00000322507 KIAA1522Q9P206 1035 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-201ENST00000322507 TLL2Q9Y6L7 1015 aa9.54□□□□□ -0.88
COL12A1-201ENST00000322507 NRP2O60462 931 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms