RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 REPS1Q96D71 796 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 NUS1Q96E22 293 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TRMT61BQ9BVS5 477 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PLAC1Q9HBJ0 212 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 FBXL12Q9NXK8 326 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 GMPPBQ9Y5P6 360 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MICAL3Q7RTP6 2002 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 LOC285095A0A1B0GVY8 99 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 BBIP1A8MTZ0 92 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 GMFGO60234 142 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 IL6P05231 212 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CD1EP15812 388 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 HMGA1P17096 107 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PPP2R1BP30154 601 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 RRM2P31350 389 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 RPL5P46777 297 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PDGFRLQ15198 375 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TCEAL5Q5H9L2 206 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TMEM31Q5JXX7 168 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 C9orf64Q5T6V5 341 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 NANOGP8Q6NSW7 305 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MED27Q6P2C8 311 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 AHI1Q8N157 1196 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 NRG4Q8WWG1 115 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 HERVK_113Q902F9 699 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TFGQ92734 400 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PROX1Q92786 737 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 KAT2AQ92830 837 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ASB9Q96DX5 294 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 NSMCE3Q96MG7 304 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 NANOGQ9H9S0 305 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PDP1Q9P0J1 537 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 FBXL21Q9UKT6 434 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ERVW-1Q9UQF0 538 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 OR1A2Q9Y585 309 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 HCFC2Q9Y5Z7 792 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CACNA1IQ9P0X4 2223 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 QSER1Q2KHR3 1735 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 A0A1W2PP18 115 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TIMP1P01033 207 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 AMD1P17707 334 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TNNI3P19429 210 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CD72P21854 359 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PTGER1P34995 402 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 BMPR1AP36894 532 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MAPK12P53778 367 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 SPIBQ01892 262 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 BRAT1Q6PJG6 821 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 SLC15A3Q8IY34 581 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PRSS58Q8IYP2 241 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF419Q96HQ0 510 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ANKRD27Q96NW4 1050 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CARS2Q9HA77 564 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MRM3Q9HC36 420 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PHPT1Q9NRX4 125 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 VPS29Q9UBQ0 182 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 LRRC37AA6NMS7 1700 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 A0A087WXM4 84 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 H7BY64 318 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CACNB4O00305 520 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CXCR6O00574 342 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 SUV39H1O43463 412 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 OR6B1O95007 311 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RPN2P04844 631 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 PRDX6P30041 224 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ACTR1BP42025 376 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RPS9P46781 194 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CCR4P51679 360 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RAB8AP61006 207 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ACTR1AP61163 376 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ATP1A4Q13733 1029 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ZC3H12BQ5HYM0 836 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 BEND5Q7L4P6 421 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 THOC6Q86W42 341 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 FAM20CQ8IXL6 584 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 TBC1D21Q8IYX1 336 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 LSMEM2Q8N112 164 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 PHF10Q8WUB8 498 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 EGLN2Q96KS0 407 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 PRAP1Q96NZ9 151 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 OSBPL11Q9BXB4 747 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CD244Q9BZW8 370 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 REXO4Q9GZR2 422 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 FAM234BA2RU67 622 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 HEPACAM2A8MVW5 462 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 MANBAO00462 879 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ACRV1P26436 265 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RPS13P62277 151 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 CSTF3Q12996 717 aaKnown RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 LILRA3Q8N6C8 439 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF540Q8NDQ6 660 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 TET1Q8NFU7 2136 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RAD51AP1Q96B01 352 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 FBXL20Q96IG2 436 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 DPH2Q9BQC3 489 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-201ENST00000321105 LRRC3Q9BY71 257 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 RAD18Q9NS91 495 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 ATAD3AQ9NVI7 634 aa10.73□□□□□ -0.69
TOP3A-201ENST00000321105 USP22Q9UPT9 525 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms