RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ADGRD2Q7Z7M1 963 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 RGL2O15211 777 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 MYCLP1P12525 358 aaPredicted RBP16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 AVPR1BP47901 424 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 XYLT1Q86Y38 959 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 PROKR2Q8NFJ6 384 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 PSKH2Q96QS6 385 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 RUVBL1Q9Y265 456 aaKnown RBP16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 AGR2O95994 175 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 PIK3CBP42338 1070 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 CASP9P55211 416 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 DNASE1L3Q13609 305 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 HSDL1Q3SXM5 330 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 ACSBG2Q5FVE4 666 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 SPATA31D1Q6ZQQ2 1576 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 B3GALT2O43825 422 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 CD40LGP29965 261 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 RPP38P78345 283 aaKnown RBP16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 SCARB2Q14108 478 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 DAG1Q14118 895 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 HID1Q8IV36 788 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 CFAP52Q8N1V2 620 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC25A51Q9H1U9 297 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 SMURF1Q9HCE7 757 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 ACSS2Q9NR19 701 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 HSD3B2P26439 372 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 RYKP34925 604 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 MOGQ16653 247 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF181Q2M3W8 571 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 SPIN4Q56A73 249 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 FUZQ9BT04 418 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 TAS2R3Q9NYW6 316 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 IGSF9Q9P2J2 1179 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 NOP16Q9Y3C1 178 aaKnown RBP16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 ARFRP1Q13795 201 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 CD300LFQ8TDQ1 290 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 LRRC58Q96CX6 371 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 USP29Q9HBJ7 922 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 FBXW2Q9UKT8 454 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 PCDHGA11Q9Y5H2 935 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 TRIP11Q15643 1979 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 OR1F1O43749 312 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 OTOP3Q7RTS5 596 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 IQCHQ86VS3 1027 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 GALNT13Q8IUC8 556 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 TTLQ8NG68 377 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 GDI2P50395 445 aaKnown RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 FAM156AQ8NDB6 213 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 HCN3Q9P1Z3 774 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 PTBP2Q9UKA9 531 aaKnown RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 JAM2P57087 298 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF45Q02386 682 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 SCP2D1Q9UJQ7 156 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 CDH10Q9Y6N8 788 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 AURKAO14965 403 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 DPEP1P16444 411 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 MPIP34949 423 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 SMAD3P84022 425 aaKnown RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 GBE1Q04446 702 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF267Q14586 743 aaPredicted RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 LCLAT1Q6UWP7 414 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 PDSS2Q86YH6 399 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 C10orf82Q8WW14 230 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 OSER1Q9NX31 292 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 VAMP1P23763 118 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 GADD45AP24522 165 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 IL17AQ16552 155 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF829Q3KNS6 432 aaPredicted RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 PTGER3P43115 390 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC13A2Q13183 592 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF676Q8N7Q3 588 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 OR10G2Q8NGC3 310 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 OSBPL7Q9BZF2 842 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 HSPB11Q9Y547 144 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 NSG1P42857 185 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC6A9P48067 706 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 FOXM1Q08050 763 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 FIP1L1Q6UN15 594 aaKnown RBP16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 TMEM126BQ8IUX1 230 aa16.54■□□□□ 0.24
SMCHD1-201ENST00000320876 B8ZZF3 427 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TLR4O00206 839 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TAF1AQ15573 450 aaPredicted RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 THRSPQ92748 146 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 ATRNO75882 1429 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 S100PP25815 95 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 OR2T5Q6IEZ7 315 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 DNM1P34Q6PK57 102 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 OR2T29Q8NH02 315 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 LOC100509620A0A075B734 347 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 ARL5CA6NH57 179 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 CHIT1Q13231 466 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 OR6K2Q8NGY2 324 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 DUSP26Q9BV47 211 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 IGFLR1Q9H665 355 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms