RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 RBFAQ8N0V3 343 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 RP9Q8TA86 221 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PNPT1Q8TCS8 783 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 WFIKKN2Q8TEU8 576 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 ELOVL2Q9NXB9 296 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CD84Q9UIB8 345 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CRLS1Q9UJA2 301 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PSME2Q9UL46 239 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 RNF112Q9ULX5 631 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 ASB1Q9Y576 335 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PCDHGA11Q9Y5H2 935 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 E5RI56 91 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SPINT1O43278 529 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CDK14O94921 469 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF7P17097 686 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PSMD8P48556 350 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 AGTR2P50052 363 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CDC20Q12834 499 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CEACAM7Q14002 265 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 NRF1Q16656 503 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 GPR33Q49SQ1 333 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TMEM26Q6ZUK4 368 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 ANKFN1Q8N957 763 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 FAM47BQ8NA70 645 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 STAG3L4Q8TBR4 150 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 STON2Q8WXE9 905 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PBXIP1Q96AQ6 731 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SH3YL1Q96HL8 342 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 CLPBQ9H078 707 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 HMG20AQ9NP66 347 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PCDH12Q9NPG4 1184 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 MRPL40Q9NQ50 206 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 DZANK1Q9NVP4 752 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 VTI1BQ9UEU0 232 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 FIS1Q9Y3D6 152 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SLCO1B7G3V0H7 640 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 ACOX3O15254 700 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 DCXO43602 365 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 NFATC1O95644 943 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 NTRK1P04629 796 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 ABCB1P08183 1280 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 RPS17P08708 135 aaKnown RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 MYCLP1P12525 358 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 HLA-EP13747 358 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF182P17025 639 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 VIPR1P32241 457 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 PTPN5P54829 565 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 FOXA1P55317 472 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 IL2P60568 153 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 SH3BP2P78314 561 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 SUZ12Q15022 739 aaKnown RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 HERC3Q15034 1050 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 UGT3A2Q3SY77 523 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 CLEC6AQ6EIG7 209 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 PTRHD1Q6GMV3 140 aaKnown RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 BRAT1Q6PJG6 821 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 TMEM184AQ6ZMB5 413 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 PARS2Q7L3T8 475 aaKnown RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 GRAMD2AQ8IUY3 354 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 ESX1Q8N693 406 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 OR13F1Q8NGS4 319 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 SUN5Q8TC36 379 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 HCAR2Q8TDS4 363 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 RASSF5Q8WWW0 418 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 ATL1Q8WXF7 558 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 S100ZQ8WXG8 99 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 SCAMP4Q969E2 229 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 PDLIM5Q96HC4 596 aaKnown RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 LENG8Q96PV6 779 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 MYADMQ96S97 322 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-201ENST00000317677 ARMC1Q9NVT9 282 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 GDE1Q9NZC3 331 aa12.75□□□□□ -0.37
CPNE1-201ENST00000317677 DENND4AQ7Z401 1863 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 IGLV3-16A0A075B6K0 115 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 NCF1BA6NI72 391 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 NCF1CA8MVU1 366 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 UPK3BL1B0FP48 263 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 UPK3BL2E5RIL1 263 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 PLOD2O00469 737 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 ALX3O95076 343 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 SLC25A14O95258 325 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-201ENST00000317677 CPNE6O95741 557 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 KRT6AP02538 564 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 KRT6BP04259 564 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 C7P10643 843 aa12.74□□□□□ -0.37
CPNE1-201ENST00000317677 BMP2P12643 396 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms