RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PTRHD1Q6GMV3 140 aaKnown RBP18.65■□□□□ 0.58
RTN4-201ENST00000317610 CEP68Q76N32 757 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 GALNT5Q7Z7M9 940 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 TMEM132CQ8N3T6 1108 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 CCDC97Q96F63 343 aaPredicted RBP18.65■□□□□ 0.58
RTN4-201ENST00000317610 SLC29A3Q9BZD2 475 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 RIBC2Q9H4K1 309 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 TM9SF3Q9HD45 589 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 CCNB1IP1Q9NPC3 277 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 SAMD4AQ9UPU9 718 aaKnown RBP18.65■□□□□ 0.58
RTN4-201ENST00000317610 A0A0U1RQS6 177 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 OR6C75A6NL08 312 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 CCNDBP1O95273 360 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 RHOCP08134 193 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 ALDH4A1P30038 563 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 GGT5P36269 586 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 GDF5P43026 501 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 OR1G1P47890 313 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 PHKG1Q16816 387 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 CLLU1OSQ5K130 101 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 TMEM236Q5W0B7 351 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 OR2T5Q6IEZ7 315 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 ELMOD1Q8N336 334 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 OR2T29Q8NH02 315 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 LKAAEAR1Q8TD35 194 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 EID2BQ96D98 161 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 ASPSCR1Q9BZE9 553 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 CRISPLD1Q9H336 500 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 RMND5AQ9H871 391 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 ACOT13Q9NPJ3 140 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 WWOXQ9NZC7 414 aa18.65■□□□□ 0.58
RTN4-201ENST00000317610 NDRG4Q9ULP0 352 aaKnown RBP18.65■□□□□ 0.58
RTN4-201ENST00000317610 KDM1AO60341 852 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 FZD6O60353 706 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 ZNF7P17097 686 aaPredicted RBP18.64■□□□□ 0.57
RTN4-201ENST00000317610 SLC11A2P49281 568 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 FCGRTP55899 365 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 NCS1P62166 190 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 RPS14P62263 151 aaKnown RBP18.64■□□□□ 0.57
RTN4-201ENST00000317610 LSM3P62310 102 aaKnown RBP18.64■□□□□ 0.57
RTN4-201ENST00000317610 SIM2Q14190 667 aaPredicted RBP18.64■□□□□ 0.57
RTN4-201ENST00000317610 TTLL9Q3SXZ7 439 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 SCAIQ8N9R8 606 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 SIGLEC11Q96RL6 698 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 APOL4Q9BPW4 351 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 CLPBQ9H078 707 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 IL1RAPQ9NPH3 570 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 SCHIP1Q9P0W5 487 aaPredicted RBP18.64■□□□□ 0.57
RTN4-201ENST00000317610 OSGIN1Q9UJX0 560 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 PRG3Q9Y2Y8 225 aaPredicted RBP18.64■□□□□ 0.57
RTN4-201ENST00000317610 TMED5Q9Y3A6 229 aa18.64■□□□□ 0.57
RTN4-201ENST00000317610 MTMR11A4FU01 709 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 LOC730098B7Z3J9 87 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 RGS10O43665 173 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 VNN2O95498 520 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 CD160O95971 181 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 SEMG1P04279 462 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 DGKAP23743 735 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 HMGCLP35914 325 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 MAD2L1BPQ15013 274 aaPredicted RBP18.63■□□□□ 0.57
RTN4-201ENST00000317610 LACC1Q8IV20 430 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 PGBD3Q8N328 593 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 CLHC1Q8NHS4 586 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 EGFL8Q99944 293 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 INPP5KQ9BT40 448 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 ANKMY1Q9P2S6 941 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 ABCG2Q9UNQ0 655 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 NOD1Q9Y239 953 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 GMPPBQ9Y5P6 360 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 CLDN24A6NM45 220 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 E9PQ18 207 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 CBX4O00257 560 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 MYCLP1P12525 358 aaPredicted RBP18.63■□□□□ 0.57
RTN4-201ENST00000317610 PSMB9P28065 219 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 S100A3P33764 101 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 ARF5P84085 180 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 CDC20Q12834 499 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 DNASE1L3Q13609 305 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 SGO1Q5FBB7 561 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 CHST9Q7L1S5 443 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 ZNF551Q7Z340 670 aaPredicted RBP18.63■□□□□ 0.57
RTN4-201ENST00000317610 SERPINA9Q86WD7 417 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 RHOXF1Q8NHV9 184 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 HERC2P3Q9BVR0 1158 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 NACA2Q9H009 215 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 RDH14Q9HBH5 336 aa18.63■□□□□ 0.57
RTN4-201ENST00000317610 GAPDHSO14556 408 aaPredicted RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 PRAMEF12O95522 483 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 EOMESO95936 686 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 CYP4B1P13584 511 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 EFNA1P20827 205 aaPredicted RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 FPR1P21462 350 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 HOXA9P31269 272 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 DNAJA1P31689 397 aaKnown RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 TGFBR2P37173 567 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 ARHGDIAP52565 204 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 PPP5CP53041 499 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 TMEM53Q6P2H8 277 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 TSPYL5Q86VY4 417 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms