RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 VPS41P49754 854 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 PGDP52209 483 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 SF1Q15637 639 aaKnown RBP17.1■□□□□ 0.33
TPM1-203ENST00000317516 DEFB110Q30KQ9 67 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 ZC3H12BQ5HYM0 836 aaKnown RBP17.1■□□□□ 0.33
TPM1-203ENST00000317516 MLIPQ5VWP3 458 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 FAM198BQ6UWH4 519 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 CES3Q6UWW8 571 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 ZNF655Q8N720 491 aaPredicted RBP17.1■□□□□ 0.33
TPM1-203ENST00000317516 DLG3Q92796 817 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 TRIM55Q9BYV6 548 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 EURLQ9NYK6 297 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 IFT80Q9P2H3 777 aaPredicted RBP17.1■□□□□ 0.33
TPM1-203ENST00000317516 NDOR1Q9UHB4 597 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 PCDHGB7Q9Y5F8 929 aa17.1■□□□□ 0.33
TPM1-203ENST00000317516 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 H3BMH7 237 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 K7EM74 188 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 IGHEP01854 428 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 ESR1P03372 595 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 MLNP12872 115 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 CHRM3P20309 590 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 MAGP20916 626 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 PEBP1P30086 187 aaKnown RBP17.09■□□□□ 0.33
TPM1-203ENST00000317516 FMO4P31512 558 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 PTGIRP43119 386 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 MAGEA6P43360 314 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 TERF1P54274 439 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 ARSFP54793 590 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 ADARP55265 1226 aaKnown RBP17.09■□□□□ 0.33
TPM1-203ENST00000317516 FOXK1P85037 733 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 KCNJ11Q14654 390 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 SSPNQ14714 243 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 ZNF385CQ66K41 422 aaPredicted RBP17.09■□□□□ 0.33
TPM1-203ENST00000317516 KIAA0930Q6ICG6 404 aaPredicted RBP17.09■□□□□ 0.33
TPM1-203ENST00000317516 MCATQ8IVS2 390 aaKnown RBP17.09■□□□□ 0.33
TPM1-203ENST00000317516 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 C2orf73Q8N5S3 287 aaPredicted RBP17.09■□□□□ 0.33
TPM1-203ENST00000317516 LINC01555Q8NAE3 123 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 ZUFSPQ96AP4 578 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
TPM1-203ENST00000317516 TENM4Q6N022 2769 aa17.08■□□□□ 0.33
TPM1-203ENST00000317516 TARM1B6A8C7 271 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 C1orf105O95561 183 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 CBSLP0DN79 551 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 PIM1P11309 404 aaPredicted RBP17.08■□□□□ 0.32
TPM1-203ENST00000317516 OGNP20774 298 aaKnown RBP17.08■□□□□ 0.32
TPM1-203ENST00000317516 ALAS2P22557 587 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 ARNTP27540 789 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 CBSP35520 551 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 GRB7Q14451 532 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 TYSND1Q2T9J0 566 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 C1orf189Q5VU69 101 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 CPZQ66K79 652 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 NEPROQ6NW34 567 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 FIGLAQ6QHK4 219 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 LPGAT1Q92604 370 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 BIRC8Q96P09 236 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 IL17FQ96PD4 163 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 GBP5Q96PP8 586 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 XAB2Q9HCS7 855 aaKnown RBP17.08■□□□□ 0.32
TPM1-203ENST00000317516 MLXIPLQ9NP71 852 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 DHCR7Q9UBM7 475 aaKnown RBP17.08■□□□□ 0.32
TPM1-203ENST00000317516 CIDEBQ9UHD4 219 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 ZNF451Q9Y4E5 1061 aa17.08■□□□□ 0.32
TPM1-203ENST00000317516 FAM237BA0A1B0GVD1 139 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 GOLGA8KD6RF30 607 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 E5RI56 91 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 GOLGA8TH3BQL2 631 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 PEX12O00623 359 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 HCRTR1O43613 425 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 AVILO75366 819 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 ATP5DP30049 168 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 COILP38432 576 aaPredicted RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 FOLR3P41439 243 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 THOC5Q13769 683 aaKnown RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 DHX34Q14147 1143 aaKnown RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 IGFBP7Q16270 282 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 NKAIN1Q4KMZ8 207 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 TCTE1Q5JU00 501 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 YOD1Q5VVQ6 348 aaPredicted RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 PAPD7Q5XG87 772 aaKnown RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 CCDC137Q6PK04 289 aaKnown RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 HPS6Q86YV9 775 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 FAM20CQ8IXL6 584 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 MCUQ8NE86 351 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 PTERQ96BW5 349 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 FER1L6-AS2Q96M78 137 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 INTS10Q9NVR2 710 aaKnown RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 KLHL20Q9Y2M5 609 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 CRYL1Q9Y2S2 319 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
TPM1-203ENST00000317516 PIKFYVEQ9Y2I7 2098 aa17.07■□□□□ 0.32
TPM1-203ENST00000317516 MYO18BQ8IUG5 2567 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms