RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ADAMTS14Q8WXS8 1223 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 TAAR8Q969N4 342 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 NLRP4Q96MN2 994 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SH3GL2Q99962 352 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 NAT10Q9H0A0 1025 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 EQTNQ9NQ60 294 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 UBA2Q9UBT2 640 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 RASAL2Q9UJF2 1139 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PAM16Q9Y3D7 125 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 MAST2Q6P0Q8 1798 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CKAP5Q14008 2032 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 GAKO14976 1311 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 IGHV4-28A0A0C4DH34 117 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 A4D1N5 150 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 WISP2O76076 250 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 BMP15O95972 392 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 UGT1A1P22309 533 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ITGB8P26012 769 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 HOXC8P31273 242 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 KRT2P35908 639 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 PLCD1P51178 756 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 BRWD1-AS2P59051 145 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 FKBP1AP62942 108 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 COG7P83436 770 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 PLIN5Q00G26 463 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ACSM1Q08AH1 577 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 C17orf67Q0P5P2 114 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 DHX34Q14147 1143 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 MELKQ14680 651 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 EZH2Q15910 746 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 FSCBQ5H9T9 825 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 RNASEH2BQ5TBB1 312 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 RBM43Q6ZSC3 357 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ERN2Q76MJ5 926 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 PIWIL3Q7Z3Z3 882 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 EMC1Q8N766 993 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 NRACQ8N912 160 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SLC38A9Q8NBW4 561 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TSPAN14Q8NG11 270 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SETD6Q8TBK2 473 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TEKT1Q969V4 418 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 DYNLL2Q96FJ2 89 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 PRMT6Q96LA8 375 aaPredicted RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF582Q96NG8 517 aaPredicted RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 LRFN5Q96NI6 719 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 RAB3IPQ96QF0 476 aaPredicted RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 MGME1Q9BQP7 344 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 FUCA2Q9BTY2 467 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TRMT1Q9NXH9 659 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 C1RLQ9NZP8 487 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 FBXL2Q9UKC9 423 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 STX8Q9UNK0 236 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 KCNJ14Q9UNX9 436 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 KCNK7Q9Y2U2 307 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TMEM184BQ9Y519 407 aaPredicted RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 KIAA1551Q9HCM1 1747 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ROBO3Q96MS0 1386 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 NRXN2Q9P2S2 1712 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 A0A1B0GVL5 298 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 GOLGA6L19H0YKK7 550 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TO15178 435 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 CLIC2O15247 247 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SLC16A5O15375 505 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 KCNN4O15554 427 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 NDUFS4O43181 175 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 XRCC3O43542 346 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 NMT2O60551 498 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 PRAMEF11O60813 436 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 FGBP02675 491 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SUPT20HL2P0C7V6 817 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 MSNP26038 577 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 CALML3P27482 149 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 NUDT6P53370 316 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SNRPEP62304 92 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SRSF7Q16629 238 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SETMARQ53H47 684 aaPredicted RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 KRT39Q6A163 491 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 RGMBQ6NW40 437 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ZBTB49Q6ZSB9 765 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TPRG1Q6ZUI0 275 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 MEPCEQ7L2J0 689 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 NAT8LQ8N9F0 302 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 IQUBQ8NA54 791 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 UTP15Q8TED0 518 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 TMEM39BQ9GZU3 492 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 C2orf40Q9H1Z8 148 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SLA2Q9H6Q3 261 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 ANO10Q9NW15 660 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 DDX25Q9UHL0 483 aaKnown RBP3.91□□□□□ -1.78
SMCO3-201ENST00000316048 SLC24A2Q9UI40 661 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 FRMD4BQ9Y2L6 1034 aa3.91□□□□□ -1.78
SMCO3-201ENST00000316048 BAZ2AQ9UIF9 1905 aaKnown RBP3.9□□□□□ -1.78
SMCO3-201ENST00000316048 LY6G6EA0A0G2JKS1 128 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 A0A1W2PP11 408 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 LINC01553A4QN01 128 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 HS3ST1O14792 307 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 AKAP8O43823 692 aaKnown RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 PLEKHA8P1O95397 391 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms