RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 C2orf73Q8N5S3 287 aaPredicted RBP14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 CFAP61Q8NHU2 1237 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 ADAMTS17Q8TE56 1095 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 NAPGQ99747 312 aaPredicted RBP14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 TRIM51Q9BSJ1 452 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 CHST8Q9H2A9 424 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 GEMIN8Q9NWZ8 242 aaKnown RBP14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 SAMD15Q9P1V8 674 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 KLK4Q9Y5K2 254 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 SAR1BQ9Y6B6 198 aa14.07□□□□□ -0.16
PPP1CA-201ENST00000312989 PCSK5Q92824 1860 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 EIF4E1BA6NMX2 242 aaKnown RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 KPNA5O15131 536 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 PSIP1O75475 530 aaKnown RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CREG1O75629 220 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 HAUS5O94927 633 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 PLA2G2AP14555 144 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 PGAM1P18669 254 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 TCN2P20062 427 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 PSMB5P28074 263 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 NFKB2Q00653 900 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 FASTKQ14296 549 aaKnown RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 PPP1R7Q15435 360 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CYP2A13Q16696 494 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 LONRF1Q17RB8 773 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 FAM69BQ5VUD6 431 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CYHR1Q6ZMK1 362 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 TMEM151BQ8IW70 566 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CNTN4Q8IWV2 1026 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 C17orf53Q8N3J3 647 aaPredicted RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 ZBTB2Q8N680 514 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 OTUD6BQ8N6M0 293 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CD200R1Q8TD46 325 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 KCNJ9Q92806 393 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 TCTN2Q96GX1 697 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 ZNF285Q96NJ3 590 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 CATSPER2Q96P56 530 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 EBNA1BP2Q99848 306 aaKnown RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 SPRTNQ9H040 489 aaPredicted RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 SYNPO2LQ9H987 977 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 C20orf96Q9NUD7 363 aaPredicted RBP14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 SLC17A6Q9P2U8 582 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 ASIC3Q9UHC3 531 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 FBXO5Q9UKT4 447 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 KCNMB2Q9Y691 235 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 MAD1L1Q9Y6D9 718 aa14.06□□□□□ -0.16
PPP1CA-201ENST00000312989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.06□□□□□ -0.163e-7■□□□□ 9.7
PPP1CA-201ENST00000312989 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 ISM1B1AKI9 464 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 B8ZZF3 427 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 MYO1CO00159 1063 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 TTI1O43156 1089 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 ZNF749O43361 778 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 CCNYL3P0C7X3 344 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 ITGAXP20702 1163 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 PTPN4P29074 926 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 CBLBQ13191 982 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 KLHL38Q2WGJ6 581 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 HSP90AA5PQ58FG0 334 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 C16orf46Q6P387 395 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 TAX1BP1Q86VP1 789 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 KLHL7Q8IXQ5 586 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 C2CD4AQ8NCU7 369 aaPredicted RBP14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 OR2A1Q8NGT9 310 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 RAD51AP1Q96B01 352 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 GBP5Q96PP8 586 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 ACTR5Q9H9F9 607 aaPredicted RBP14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 KLHL42Q9P2K6 505 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 KCND3Q9UK17 655 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 COL6A6A6NMZ7 2263 aa14.05□□□□□ -0.16
PPP1CA-201ENST00000312989 E7EQ34 232 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 CTSVO60911 334 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 CNOT3O75175 753 aaKnown RBP14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 KATNA1O75449 491 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 SEC31AO94979 1220 aaKnown RBP14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 RPN2P04844 631 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 RAB40ALP0C0E4 278 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 CBSLP0DN79 551 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 ERVK-10P10266 1014 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 CBSP35520 551 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 ITGA1P56199 1179 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 DR1Q01658 176 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 MC1RQ01726 317 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 CUL1Q13616 776 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 ERV3-1Q14264 604 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 UGT8Q16880 541 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 DEFB109BQ30KR1 87 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 PTCHD3Q3KNS1 767 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 STEAP4Q687X5 459 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 RHBDD2Q6NTF9 364 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 SYDE1Q6ZW31 735 aaPredicted RBP14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 KCNMB4Q86W47 210 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 LRRC56Q8IYG6 542 aaPredicted RBP14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 SYTL1Q8IYJ3 562 aa14.04□□□□□ -0.16
PPP1CA-201ENST00000312989 AARSD1Q9BTE6 412 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms